Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.91■□□□□ 0.78
Colca2F8VPY8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Colca2F8VPY8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Colca2F8VPY8 AV356131-201ENSMUST00000206201 750 ntBASIC19.9■□□□□ 0.78
Colca2F8VPY8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Colca2F8VPY8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Colca2F8VPY8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Colca2F8VPY8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.9■□□□□ 0.78
Colca2F8VPY8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Colca2F8VPY8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Colca2F8VPY8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Colca2F8VPY8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Colca2F8VPY8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Colca2F8VPY8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Colca2F8VPY8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Colca2F8VPY8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Colca2F8VPY8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Colca2F8VPY8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Colca2F8VPY8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Colca2F8VPY8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Colca2F8VPY8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Colca2F8VPY8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Colca2F8VPY8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.86■□□□□ 0.77
Colca2F8VPY8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Colca2F8VPY8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Colca2F8VPY8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Colca2F8VPY8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.84■□□□□ 0.77
Colca2F8VPY8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Colca2F8VPY8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Colca2F8VPY8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.83■□□□□ 0.77
Colca2F8VPY8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Colca2F8VPY8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Colca2F8VPY8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Colca2F8VPY8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Colca2F8VPY8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Colca2F8VPY8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Colca2F8VPY8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Colca2F8VPY8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.82■□□□□ 0.76
Colca2F8VPY8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Colca2F8VPY8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.82■□□□□ 0.76
Colca2F8VPY8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Colca2F8VPY8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Colca2F8VPY8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.82■□□□□ 0.76
Colca2F8VPY8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Colca2F8VPY8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Colca2F8VPY8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.81■□□□□ 0.76
Colca2F8VPY8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Colca2F8VPY8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Colca2F8VPY8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Colca2F8VPY8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.79■□□□□ 0.76
Colca2F8VPY8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Colca2F8VPY8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Colca2F8VPY8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Colca2F8VPY8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.78■□□□□ 0.76
Colca2F8VPY8 Gm42778-201ENSMUST00000199644 553 ntBASIC19.78■□□□□ 0.76
Colca2F8VPY8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Colca2F8VPY8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Colca2F8VPY8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Colca2F8VPY8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms