Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Hfm1D3Z4R1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Hfm1D3Z4R1 Gm10209-201ENSMUST00000203397 1607 ntBASIC29.55■■■□□ 2.32
Hfm1D3Z4R1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Hfm1D3Z4R1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Hfm1D3Z4R1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Hfm1D3Z4R1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Hfm1D3Z4R1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC29.54■■■□□ 2.32
Hfm1D3Z4R1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC29.54■■■□□ 2.32
Hfm1D3Z4R1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Hfm1D3Z4R1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Hfm1D3Z4R1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Hfm1D3Z4R1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC29.53■■■□□ 2.32
Hfm1D3Z4R1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC29.53■■■□□ 2.32
Hfm1D3Z4R1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Hfm1D3Z4R1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Hfm1D3Z4R1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Hfm1D3Z4R1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC29.52■■■□□ 2.32
Hfm1D3Z4R1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC29.52■■■□□ 2.32
Hfm1D3Z4R1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC29.52■■■□□ 2.32
Hfm1D3Z4R1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
Hfm1D3Z4R1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Hfm1D3Z4R1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Hfm1D3Z4R1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC29.51■■■□□ 2.31
Hfm1D3Z4R1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Hfm1D3Z4R1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Hfm1D3Z4R1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Hfm1D3Z4R1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Hfm1D3Z4R1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Hfm1D3Z4R1 Gm18671-201ENSMUST00000214826 683 ntBASIC29.5■■■□□ 2.31
Hfm1D3Z4R1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC29.5■■■□□ 2.31
Hfm1D3Z4R1 AV356131-201ENSMUST00000206201 750 ntBASIC29.49■■■□□ 2.31
Hfm1D3Z4R1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Hfm1D3Z4R1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
Hfm1D3Z4R1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Hfm1D3Z4R1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC29.47■■■□□ 2.31
Hfm1D3Z4R1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
Hfm1D3Z4R1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC29.47■■■□□ 2.31
Hfm1D3Z4R1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC29.47■■■□□ 2.31
Hfm1D3Z4R1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Hfm1D3Z4R1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC29.47■■■□□ 2.31
Hfm1D3Z4R1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC29.47■■■□□ 2.31
Hfm1D3Z4R1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Hfm1D3Z4R1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Hfm1D3Z4R1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Hfm1D3Z4R1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Hfm1D3Z4R1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
Hfm1D3Z4R1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
Hfm1D3Z4R1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Hfm1D3Z4R1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Hfm1D3Z4R1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
Hfm1D3Z4R1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Hfm1D3Z4R1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC29.45■■■□□ 2.3
Hfm1D3Z4R1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
Hfm1D3Z4R1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Hfm1D3Z4R1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Hfm1D3Z4R1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Hfm1D3Z4R1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Hfm1D3Z4R1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Hfm1D3Z4R1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC29.44■■■□□ 2.3
Hfm1D3Z4R1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Hfm1D3Z4R1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Hfm1D3Z4R1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Hfm1D3Z4R1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC29.43■■■□□ 2.3
Hfm1D3Z4R1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Hfm1D3Z4R1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Hfm1D3Z4R1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Hfm1D3Z4R1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Hfm1D3Z4R1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Hfm1D3Z4R1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Hfm1D3Z4R1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Hfm1D3Z4R1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Hfm1D3Z4R1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Hfm1D3Z4R1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Hfm1D3Z4R1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC29.39■■■□□ 2.3
Hfm1D3Z4R1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC29.39■■■□□ 2.3
Hfm1D3Z4R1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Hfm1D3Z4R1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Hfm1D3Z4R1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Hfm1D3Z4R1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Hfm1D3Z4R1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Hfm1D3Z4R1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Hfm1D3Z4R1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Hfm1D3Z4R1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Hfm1D3Z4R1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Hfm1D3Z4R1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Hfm1D3Z4R1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC29.38■■■□□ 2.29
Hfm1D3Z4R1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Hfm1D3Z4R1 Gm12669-201ENSMUST00000122162 1009 ntBASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Hfm1D3Z4R1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC29.36■■■□□ 2.29
Hfm1D3Z4R1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms