Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim17A0A504 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smim17A0A504 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim17A0A504 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim17A0A504 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smim17A0A504 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim17A0A504 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim17A0A504 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim17A0A504 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Smim17A0A504 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Smim17A0A504 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.57■□□□□ 0.56
Smim17A0A504 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim17A0A504 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim17A0A504 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim17A0A504 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smim17A0A504 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smim17A0A504 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smim17A0A504 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.56■□□□□ 0.56
Smim17A0A504 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smim17A0A504 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smim17A0A504 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.56■□□□□ 0.56
Smim17A0A504 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.55■□□□□ 0.56
Smim17A0A504 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.55■□□□□ 0.56
Smim17A0A504 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smim17A0A504 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.55■□□□□ 0.56
Smim17A0A504 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.55■□□□□ 0.56
Smim17A0A504 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smim17A0A504 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smim17A0A504 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim17A0A504 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim17A0A504 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.54■□□□□ 0.56
Smim17A0A504 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim17A0A504 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smim17A0A504 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Smim17A0A504 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Smim17A0A504 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim17A0A504 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smim17A0A504 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Smim17A0A504 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.53■□□□□ 0.56
Smim17A0A504 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.53■□□□□ 0.56
Smim17A0A504 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim17A0A504 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim17A0A504 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.53■□□□□ 0.56
Smim17A0A504 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim17A0A504 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim17A0A504 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smim17A0A504 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim17A0A504 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim17A0A504 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim17A0A504 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim17A0A504 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim17A0A504 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.52■□□□□ 0.56
Smim17A0A504 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim17A0A504 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smim17A0A504 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Smim17A0A504 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Smim17A0A504 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smim17A0A504 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.52■□□□□ 0.55
Smim17A0A504 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.51■□□□□ 0.55
Smim17A0A504 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smim17A0A504 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.51■□□□□ 0.55
Smim17A0A504 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smim17A0A504 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Smim17A0A504 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim17A0A504 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim17A0A504 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smim17A0A504 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim17A0A504 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim17A0A504 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim17A0A504 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim17A0A504 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.5■□□□□ 0.55
Smim17A0A504 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.5■□□□□ 0.55
Smim17A0A504 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim17A0A504 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim17A0A504 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim17A0A504 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smim17A0A504 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim17A0A504 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim17A0A504 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smim17A0A504 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.49■□□□□ 0.55
Smim17A0A504 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.49■□□□□ 0.55
Smim17A0A504 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.49■□□□□ 0.55
Smim17A0A504 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms