Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.14■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Gm9870-201ENSMUST00000063874 645 ntBASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl13a-ps1A0A140T8K2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.08■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.08■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.07■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.07■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.06■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.05■□□□□ 0.32
Rpl13a-ps1A0A140T8K2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms