Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trbv12-2A0A0B4J1H1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Trbv12-2A0A0B4J1H1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv12-2A0A0B4J1H1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.21■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms