Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav14d-1A0A075B6B1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav14d-1A0A075B6B1 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.3■□□□□ 0.04
Trav14d-1A0A075B6B1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav14d-1A0A075B6B1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav14d-1A0A075B6B1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav14d-1A0A075B6B1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav14d-1A0A075B6B1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav14d-1A0A075B6B1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14d-1A0A075B6B1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav14d-1A0A075B6B1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.27■□□□□ 0.03
Trav14d-1A0A075B6B1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14d-1A0A075B6B1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14d-1A0A075B6B1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14d-1A0A075B6B1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14d-1A0A075B6B1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trav14d-1A0A075B6B1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14d-1A0A075B6B1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav14d-1A0A075B6B1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14d-1A0A075B6B1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14d-1A0A075B6B1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav14d-1A0A075B6B1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14d-1A0A075B6B1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms