Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5538W4VSP6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Gm5538W4VSP6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.16■□□□□ 0.98
Gm5538W4VSP6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5538W4VSP6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gm5538W4VSP6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.16■□□□□ 0.98
Gm5538W4VSP6 Gm40881-201ENSMUST00000223397 166 ntBASIC21.16■□□□□ 0.98
Gm5538W4VSP6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.15■□□□□ 0.98
Gm5538W4VSP6 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.15■□□□□ 0.98
Gm5538W4VSP6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5538W4VSP6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5538W4VSP6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5538W4VSP6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5538W4VSP6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm5538W4VSP6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Gm5538W4VSP6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm5538W4VSP6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.14■□□□□ 0.97
Gm5538W4VSP6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.14■□□□□ 0.97
Gm5538W4VSP6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5538W4VSP6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5538W4VSP6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5538W4VSP6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5538W4VSP6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5538W4VSP6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm5538W4VSP6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.13■□□□□ 0.97
Gm5538W4VSP6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5538W4VSP6 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.13■□□□□ 0.97
Gm5538W4VSP6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5538W4VSP6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm5538W4VSP6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5538W4VSP6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm5538W4VSP6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5538W4VSP6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5538W4VSP6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5538W4VSP6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.12■□□□□ 0.97
Gm5538W4VSP6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5538W4VSP6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Gm5538W4VSP6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm5538W4VSP6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.11■□□□□ 0.97
Gm5538W4VSP6 Gm9959-201ENSMUST00000068277 390 ntBASIC21.11■□□□□ 0.97
Gm5538W4VSP6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm5538W4VSP6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.1■□□□□ 0.97
Gm5538W4VSP6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.1■□□□□ 0.97
Gm5538W4VSP6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.1■□□□□ 0.97
Gm5538W4VSP6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.1■□□□□ 0.97
Gm5538W4VSP6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5538W4VSP6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.09■□□□□ 0.97
Gm5538W4VSP6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5538W4VSP6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5538W4VSP6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5538W4VSP6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5538W4VSP6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Gm5538W4VSP6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5538W4VSP6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Gm5538W4VSP6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm5538W4VSP6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm5538W4VSP6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5538W4VSP6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5538W4VSP6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.07■□□□□ 0.96
Gm5538W4VSP6 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.07■□□□□ 0.96
Gm5538W4VSP6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5538W4VSP6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5538W4VSP6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gm5538W4VSP6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5538W4VSP6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5538W4VSP6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5538W4VSP6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5538W4VSP6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.06■□□□□ 0.96
Gm5538W4VSP6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5538W4VSP6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Gm5538W4VSP6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.06■□□□□ 0.96
Gm5538W4VSP6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5538W4VSP6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5538W4VSP6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5538W4VSP6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5538W4VSP6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5538W4VSP6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5538W4VSP6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm5538W4VSP6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5538W4VSP6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5538W4VSP6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm5538W4VSP6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5538W4VSP6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5538W4VSP6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.04■□□□□ 0.96
Gm5538W4VSP6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5538W4VSP6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.03■□□□□ 0.96
Gm5538W4VSP6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5538W4VSP6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5538W4VSP6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5538W4VSP6 Etf1-202ENSMUST00000180351 108 ntBASIC21.03■□□□□ 0.96
Gm5538W4VSP6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms