Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Cdh17Q9R100 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh17Q9R100 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh17Q9R100 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cdh17Q9R100 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh17Q9R100 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh17Q9R100 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cdh17Q9R100 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.15■□□□□ 0.82
Cdh17Q9R100 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.15■□□□□ 0.82
Cdh17Q9R100 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh17Q9R100 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh17Q9R100 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh17Q9R100 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh17Q9R100 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh17Q9R100 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cdh17Q9R100 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.14■□□□□ 0.81
Cdh17Q9R100 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Gm45444-201ENSMUST00000211394 898 ntBASIC20.14■□□□□ 0.81
Cdh17Q9R100 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.14■□□□□ 0.81
Cdh17Q9R100 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh17Q9R100 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cdh17Q9R100 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cdh17Q9R100 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh17Q9R100 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh17Q9R100 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh17Q9R100 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.13■□□□□ 0.81
Cdh17Q9R100 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Cdh17Q9R100 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.13■□□□□ 0.81
Cdh17Q9R100 Cap2-205ENSMUST00000225824 1634 ntBASIC20.13■□□□□ 0.81
Cdh17Q9R100 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh17Q9R100 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh17Q9R100 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh17Q9R100 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cdh17Q9R100 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh17Q9R100 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.12■□□□□ 0.81
Cdh17Q9R100 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cdh17Q9R100 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.12■□□□□ 0.81
Cdh17Q9R100 Notumos-201ENSMUST00000151998 2659 ntBASIC20.12■□□□□ 0.81
Cdh17Q9R100 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh17Q9R100 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh17Q9R100 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cdh17Q9R100 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh17Q9R100 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh17Q9R100 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh17Q9R100 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh17Q9R100 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cdh17Q9R100 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cdh17Q9R100 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh17Q9R100 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.09■□□□□ 0.81
Cdh17Q9R100 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh17Q9R100 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms