Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC021242.3-201ENST00000607598 1377 ntBASIC20.02■□□□□ 0.8
CDH20Q9HBT6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH20Q9HBT6 AL022069.1-201ENST00000568025 1636 ntBASIC20.02■□□□□ 0.79
CDH20Q9HBT6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH20Q9HBT6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH20Q9HBT6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH20Q9HBT6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH20Q9HBT6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH20Q9HBT6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH20Q9HBT6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDH20Q9HBT6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH20Q9HBT6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH20Q9HBT6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH20Q9HBT6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH20Q9HBT6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20■□□□□ 0.79
CDH20Q9HBT6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20■□□□□ 0.79
CDH20Q9HBT6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20■□□□□ 0.79
CDH20Q9HBT6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20■□□□□ 0.79
CDH20Q9HBT6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20■□□□□ 0.79
CDH20Q9HBT6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH20Q9HBT6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 AL139125.2-201ENST00000623134 1869 ntBASIC19.99■□□□□ 0.79
CDH20Q9HBT6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDH20Q9HBT6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 LINC01124-201ENST00000409786 2117 ntBASIC19.98■□□□□ 0.79
CDH20Q9HBT6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CDH20Q9HBT6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.97■□□□□ 0.79
CDH20Q9HBT6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 AL161729.1-201ENST00000604104 1402 ntBASIC19.97■□□□□ 0.79
CDH20Q9HBT6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH20Q9HBT6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH20Q9HBT6 AC141586.4-201ENST00000624558 1573 ntBASIC19.96■□□□□ 0.79
CDH20Q9HBT6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH20Q9HBT6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH20Q9HBT6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH20Q9HBT6 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.96■□□□□ 0.79
CDH20Q9HBT6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH20Q9HBT6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CDH20Q9HBT6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH20Q9HBT6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 TSPY9P-201ENST00000440215 945 ntBASIC19.95■□□□□ 0.78
CDH20Q9HBT6 TSPY11P-201ENST00000442607 1045 ntBASIC19.95■□□□□ 0.78
CDH20Q9HBT6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 AC092028.1-203ENST00000608262 953 ntBASIC19.95■□□□□ 0.78
CDH20Q9HBT6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 AC131274.2-201ENST00000580697 1507 ntBASIC19.95■□□□□ 0.78
CDH20Q9HBT6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDH20Q9HBT6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH20Q9HBT6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms