Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BRD9Q9H8M2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
BRD9Q9H8M2 AF213884.3-201ENST00000563833 479 ntBASIC23.86■■□□□ 1.41
BRD9Q9H8M2 MIR5787-201ENST00000611784 55 ntBASIC23.86■■□□□ 1.41
BRD9Q9H8M2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BRD9Q9H8M2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
BRD9Q9H8M2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.85■■□□□ 1.41
BRD9Q9H8M2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
BRD9Q9H8M2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.85■■□□□ 1.41
BRD9Q9H8M2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.85■■□□□ 1.41
BRD9Q9H8M2 AL136967.2-201ENST00000623968 743 ntBASIC23.85■■□□□ 1.41
BRD9Q9H8M2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BRD9Q9H8M2 SYT6-210ENST00000641643 1587 ntBASIC23.83■■□□□ 1.41
BRD9Q9H8M2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.83■■□□□ 1.41
BRD9Q9H8M2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.83■■□□□ 1.41
BRD9Q9H8M2 AC092171.4-201ENST00000609130 632 ntBASIC23.83■■□□□ 1.41
BRD9Q9H8M2 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.83■■□□□ 1.41
BRD9Q9H8M2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
BRD9Q9H8M2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
BRD9Q9H8M2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.83■■□□□ 1.4
BRD9Q9H8M2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BRD9Q9H8M2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 MIR939-201ENST00000401314 82 ntBASIC23.81■■□□□ 1.4
BRD9Q9H8M2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
BRD9Q9H8M2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.8■■□□□ 1.4
BRD9Q9H8M2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRD9Q9H8M2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRD9Q9H8M2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BRD9Q9H8M2 AP001330.3-201ENST00000520123 633 ntBASIC23.8■■□□□ 1.4
BRD9Q9H8M2 AC104564.3-201ENST00000582367 638 ntBASIC23.8■■□□□ 1.4
BRD9Q9H8M2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRD9Q9H8M2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
BRD9Q9H8M2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRD9Q9H8M2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRD9Q9H8M2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRD9Q9H8M2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.79■■□□□ 1.4
BRD9Q9H8M2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRD9Q9H8M2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRD9Q9H8M2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRD9Q9H8M2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRD9Q9H8M2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRD9Q9H8M2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
BRD9Q9H8M2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BRD9Q9H8M2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
BRD9Q9H8M2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.77■■□□□ 1.4
BRD9Q9H8M2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BRD9Q9H8M2 AC091305.1-201ENST00000479476 895 ntBASIC23.77■■□□□ 1.4
BRD9Q9H8M2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD9Q9H8M2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD9Q9H8M2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
BRD9Q9H8M2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRD9Q9H8M2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.76■■□□□ 1.39
BRD9Q9H8M2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.76■■□□□ 1.39
BRD9Q9H8M2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.76■■□□□ 1.39
BRD9Q9H8M2 MIR4767-201ENST00000582827 78 ntBASIC23.76■■□□□ 1.39
BRD9Q9H8M2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRD9Q9H8M2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.75■■□□□ 1.39
BRD9Q9H8M2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.74■■□□□ 1.39
BRD9Q9H8M2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.74■■□□□ 1.39
BRD9Q9H8M2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.74■■□□□ 1.39
BRD9Q9H8M2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
BRD9Q9H8M2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.74■■□□□ 1.39
BRD9Q9H8M2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.74■■□□□ 1.39
BRD9Q9H8M2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BRD9Q9H8M2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
BRD9Q9H8M2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
BRD9Q9H8M2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms