Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scrt1Q99M85 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.1■□□□□ 0.49
Scrt1Q99M85 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scrt1Q99M85 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scrt1Q99M85 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scrt1Q99M85 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scrt1Q99M85 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
Scrt1Q99M85 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scrt1Q99M85 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scrt1Q99M85 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scrt1Q99M85 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.08■□□□□ 0.49
Scrt1Q99M85 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scrt1Q99M85 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scrt1Q99M85 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Scrt1Q99M85 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Scrt1Q99M85 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.08■□□□□ 0.48
Scrt1Q99M85 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scrt1Q99M85 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scrt1Q99M85 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scrt1Q99M85 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scrt1Q99M85 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scrt1Q99M85 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scrt1Q99M85 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scrt1Q99M85 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scrt1Q99M85 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scrt1Q99M85 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Scrt1Q99M85 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scrt1Q99M85 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scrt1Q99M85 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Scrt1Q99M85 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scrt1Q99M85 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scrt1Q99M85 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scrt1Q99M85 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scrt1Q99M85 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.04■□□□□ 0.48
Scrt1Q99M85 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scrt1Q99M85 Gm43017-201ENSMUST00000198296 752 ntBASIC18.04■□□□□ 0.48
Scrt1Q99M85 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scrt1Q99M85 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Scrt1Q99M85 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Gm43137-201ENSMUST00000198052 594 ntBASIC18.03■□□□□ 0.48
Scrt1Q99M85 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.03■□□□□ 0.48
Scrt1Q99M85 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scrt1Q99M85 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scrt1Q99M85 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scrt1Q99M85 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.02■□□□□ 0.48
Scrt1Q99M85 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Scrt1Q99M85 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.02■□□□□ 0.48
Scrt1Q99M85 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scrt1Q99M85 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scrt1Q99M85 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scrt1Q99M85 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scrt1Q99M85 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scrt1Q99M85 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scrt1Q99M85 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Scrt1Q99M85 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.01■□□□□ 0.47
Scrt1Q99M85 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scrt1Q99M85 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scrt1Q99M85 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scrt1Q99M85 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Scrt1Q99M85 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scrt1Q99M85 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Scrt1Q99M85 Gm21168-201ENSMUST00000199646 1096 ntBASIC18■□□□□ 0.47
Scrt1Q99M85 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms