Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cdk9Q99J95 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Gm16437-201ENSMUST00000025669 507 ntBASIC20.68■□□□□ 0.9
Cdk9Q99J95 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk9Q99J95 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk9Q99J95 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk9Q99J95 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.66■□□□□ 0.9
Cdk9Q99J95 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk9Q99J95 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk9Q99J95 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk9Q99J95 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk9Q99J95 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk9Q99J95 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.65■□□□□ 0.9
Cdk9Q99J95 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk9Q99J95 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdk9Q99J95 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk9Q99J95 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cdk9Q99J95 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
Cdk9Q99J95 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cdk9Q99J95 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cdk9Q99J95 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk9Q99J95 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk9Q99J95 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk9Q99J95 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk9Q99J95 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk9Q99J95 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cdk9Q99J95 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdk9Q99J95 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk9Q99J95 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.62■□□□□ 0.89
Cdk9Q99J95 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk9Q99J95 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk9Q99J95 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk9Q99J95 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdk9Q99J95 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk9Q99J95 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.61■□□□□ 0.89
Cdk9Q99J95 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk9Q99J95 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cdk9Q99J95 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cdk9Q99J95 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk9Q99J95 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk9Q99J95 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk9Q99J95 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cdk9Q99J95 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms