Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.65■■□□□ 1.22
SH3KBP1Q96B97 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.65■■□□□ 1.22
SH3KBP1Q96B97 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3KBP1Q96B97 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3KBP1Q96B97 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.65■■□□□ 1.22
SH3KBP1Q96B97 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3KBP1Q96B97 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SH3KBP1Q96B97 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3KBP1Q96B97 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3KBP1Q96B97 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.22
SH3KBP1Q96B97 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SH3KBP1Q96B97 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.64■■□□□ 1.21
SH3KBP1Q96B97 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SH3KBP1Q96B97 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.64■■□□□ 1.21
SH3KBP1Q96B97 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SH3KBP1Q96B97 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.64■■□□□ 1.21
SH3KBP1Q96B97 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 MIR6724-1-201ENST00000616420 92 ntBASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 MIR6724-2-201ENST00000616483 92 ntBASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 MIR6724-4-201ENST00000617390 92 ntBASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 MIR6724-3-201ENST00000622482 92 ntBASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 AC008406.3-201ENST00000620001 1374 ntBASIC22.63■■□□□ 1.21
SH3KBP1Q96B97 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 AP003733.4-201ENST00000623785 1697 ntBASIC22.62■■□□□ 1.21
SH3KBP1Q96B97 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 MIR6089-201ENST00000616698 64 ntBASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SH3KBP1Q96B97 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SH3KBP1Q96B97 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.59■■□□□ 1.21
SH3KBP1Q96B97 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SH3KBP1Q96B97 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3KBP1Q96B97 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3KBP1Q96B97 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.59■■□□□ 1.21
SH3KBP1Q96B97 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3KBP1Q96B97 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3KBP1Q96B97 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SH3KBP1Q96B97 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 AL356740.2-201ENST00000601559 647 ntBASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 AL139125.2-201ENST00000623134 1869 ntBASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3KBP1Q96B97 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 MIR6722-201ENST00000617286 78 ntBASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3KBP1Q96B97 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3KBP1Q96B97 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SH3KBP1Q96B97 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SH3KBP1Q96B97 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3KBP1Q96B97 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms