Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H1fooQ8VIK3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H1fooQ8VIK3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
H1fooQ8VIK3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
H1fooQ8VIK3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H1fooQ8VIK3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H1fooQ8VIK3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
H1fooQ8VIK3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H1fooQ8VIK3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H1fooQ8VIK3 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.27■□□□□ 0.35
H1fooQ8VIK3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H1fooQ8VIK3 Gm13238-201ENSMUST00000117655 780 ntBASIC17.26■□□□□ 0.35
H1fooQ8VIK3 Gm43566-201ENSMUST00000196851 808 ntBASIC17.26■□□□□ 0.35
H1fooQ8VIK3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H1fooQ8VIK3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H1fooQ8VIK3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H1fooQ8VIK3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
H1fooQ8VIK3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.24■□□□□ 0.35
H1fooQ8VIK3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H1fooQ8VIK3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H1fooQ8VIK3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H1fooQ8VIK3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H1fooQ8VIK3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
H1fooQ8VIK3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
H1fooQ8VIK3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.2■□□□□ 0.34
H1fooQ8VIK3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H1fooQ8VIK3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
H1fooQ8VIK3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H1fooQ8VIK3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H1fooQ8VIK3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H1fooQ8VIK3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
H1fooQ8VIK3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
H1fooQ8VIK3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H1fooQ8VIK3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
H1fooQ8VIK3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
H1fooQ8VIK3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H1fooQ8VIK3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H1fooQ8VIK3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
H1fooQ8VIK3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
H1fooQ8VIK3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H1fooQ8VIK3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms