Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rpp40Q8R1F9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Rpp40Q8R1F9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rpp40Q8R1F9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rpp40Q8R1F9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rpp40Q8R1F9 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.22■■□□□ 1.15
Rpp40Q8R1F9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rpp40Q8R1F9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.22■■□□□ 1.15
Rpp40Q8R1F9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.22■■□□□ 1.15
Rpp40Q8R1F9 Gm9870-201ENSMUST00000063874 645 ntBASIC22.22■■□□□ 1.15
Rpp40Q8R1F9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rpp40Q8R1F9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.22■■□□□ 1.15
Rpp40Q8R1F9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Gm12922-201ENSMUST00000120626 809 ntBASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpp40Q8R1F9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rpp40Q8R1F9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rpp40Q8R1F9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rpp40Q8R1F9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.2■■□□□ 1.14
Rpp40Q8R1F9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rpp40Q8R1F9 Gm9847-201ENSMUST00000052528 599 ntBASIC22.2■■□□□ 1.14
Rpp40Q8R1F9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Rpp40Q8R1F9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Gm7143-201ENSMUST00000222811 859 ntBASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpp40Q8R1F9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
Rpp40Q8R1F9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.17■■□□□ 1.14
Rpp40Q8R1F9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rpp40Q8R1F9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rpp40Q8R1F9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Rpp40Q8R1F9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rpp40Q8R1F9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rpp40Q8R1F9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.16■■□□□ 1.14
Rpp40Q8R1F9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Rpp40Q8R1F9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Rpp40Q8R1F9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rpp40Q8R1F9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rpp40Q8R1F9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Golgb1-201ENSMUST00000023534 498 ntBASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp40Q8R1F9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Rpp40Q8R1F9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rpp40Q8R1F9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.14■■□□□ 1.13
Rpp40Q8R1F9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rpp40Q8R1F9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rpp40Q8R1F9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rpp40Q8R1F9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rpp40Q8R1F9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.14■■□□□ 1.13
Rpp40Q8R1F9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.14■■□□□ 1.13
Rpp40Q8R1F9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 Gm21956-201ENSMUST00000179946 522 ntBASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
Rpp40Q8R1F9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms