Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRT78Q8N1N4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
KRT78Q8N1N4 AC004812.2-201ENST00000611079 2094 ntBASIC22.13■■□□□ 1.13
KRT78Q8N1N4 AF131216.4-201ENST00000638924 1588 ntBASIC22.13■■□□□ 1.13
KRT78Q8N1N4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KRT78Q8N1N4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.13■■□□□ 1.13
KRT78Q8N1N4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KRT78Q8N1N4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
KRT78Q8N1N4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
KRT78Q8N1N4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
KRT78Q8N1N4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.12■■□□□ 1.13
KRT78Q8N1N4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
KRT78Q8N1N4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KRT78Q8N1N4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
KRT78Q8N1N4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.12■■□□□ 1.13
KRT78Q8N1N4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT78Q8N1N4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT78Q8N1N4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 RARRES2P1-201ENST00000474487 481 ntBASIC22.09■■□□□ 1.13
KRT78Q8N1N4 AC131274.2-201ENST00000580697 1507 ntBASIC22.09■■□□□ 1.13
KRT78Q8N1N4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT78Q8N1N4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT78Q8N1N4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT78Q8N1N4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.08■■□□□ 1.13
KRT78Q8N1N4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT78Q8N1N4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT78Q8N1N4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KRT78Q8N1N4 AC137630.3-201ENST00000607245 391 ntBASIC22.08■■□□□ 1.13
KRT78Q8N1N4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT78Q8N1N4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.07■■□□□ 1.12
KRT78Q8N1N4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT78Q8N1N4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.06■■□□□ 1.12
KRT78Q8N1N4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
KRT78Q8N1N4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRT78Q8N1N4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRT78Q8N1N4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
KRT78Q8N1N4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
KRT78Q8N1N4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
KRT78Q8N1N4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 BX664725.1-201ENST00000438252 379 ntBASIC22.04■■□□□ 1.12
KRT78Q8N1N4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.04■■□□□ 1.12
KRT78Q8N1N4 ABCB10P4-201ENST00000566803 2184 ntBASIC22.04■■□□□ 1.12
KRT78Q8N1N4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
KRT78Q8N1N4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms