Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hist3h2bbQ8CGP0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Hist3h2bbQ8CGP0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hist3h2bbQ8CGP0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist3h2bbQ8CGP0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hist3h2bbQ8CGP0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hist3h2bbQ8CGP0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist3h2bbQ8CGP0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist3h2bbQ8CGP0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist3h2bbQ8CGP0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist3h2bbQ8CGP0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hist3h2bbQ8CGP0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hist3h2bbQ8CGP0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hist3h2bbQ8CGP0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hist3h2bbQ8CGP0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hist3h2bbQ8CGP0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hist3h2bbQ8CGP0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist3h2bbQ8CGP0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Grk6-206ENSMUST00000224995 2971 ntBASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist3h2bbQ8CGP0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.74■□□□□ 0.11
Hist3h2bbQ8CGP0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist3h2bbQ8CGP0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist3h2bbQ8CGP0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist3h2bbQ8CGP0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hist3h2bbQ8CGP0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist3h2bbQ8CGP0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist3h2bbQ8CGP0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist3h2bbQ8CGP0 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms