Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Lysmd4Q8CC84 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd4Q8CC84 Golph3-202ENSMUST00000226517 2359 ntBASIC18.58■□□□□ 0.56
Lysmd4Q8CC84 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd4Q8CC84 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Lysmd4Q8CC84 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd4Q8CC84 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd4Q8CC84 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd4Q8CC84 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lysmd4Q8CC84 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lysmd4Q8CC84 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lysmd4Q8CC84 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lysmd4Q8CC84 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Iqck-206ENSMUST00000208658 2891 ntBASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd4Q8CC84 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd4Q8CC84 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd4Q8CC84 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd4Q8CC84 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lysmd4Q8CC84 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lysmd4Q8CC84 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd4Q8CC84 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lysmd4Q8CC84 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lysmd4Q8CC84 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd4Q8CC84 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd4Q8CC84 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lysmd4Q8CC84 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lysmd4Q8CC84 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lysmd4Q8CC84 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lysmd4Q8CC84 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Lysmd4Q8CC84 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lysmd4Q8CC84 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd4Q8CC84 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd4Q8CC84 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.48■□□□□ 0.55
Lysmd4Q8CC84 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Lysmd4Q8CC84 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd4Q8CC84 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd4Q8CC84 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd4Q8CC84 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd4Q8CC84 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms