Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Uba3Q8C878 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Uba3Q8C878 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Uba3Q8C878 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Uba3Q8C878 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Uba3Q8C878 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.79■■□□□ 1.08
Uba3Q8C878 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.79■■□□□ 1.08
Uba3Q8C878 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.79■■□□□ 1.08
Uba3Q8C878 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Uba3Q8C878 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Uba3Q8C878 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.78■■□□□ 1.08
Uba3Q8C878 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Uba3Q8C878 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Uba3Q8C878 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Uba3Q8C878 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Uba3Q8C878 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Uba3Q8C878 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Uba3Q8C878 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Uba3Q8C878 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Uba3Q8C878 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Uba3Q8C878 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Uba3Q8C878 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Uba3Q8C878 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uba3Q8C878 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.76■■□□□ 1.07
Uba3Q8C878 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.76■■□□□ 1.07
Uba3Q8C878 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uba3Q8C878 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.76■■□□□ 1.07
Uba3Q8C878 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uba3Q8C878 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Uba3Q8C878 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uba3Q8C878 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.76■■□□□ 1.07
Uba3Q8C878 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Uba3Q8C878 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
Uba3Q8C878 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uba3Q8C878 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uba3Q8C878 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Uba3Q8C878 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Uba3Q8C878 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uba3Q8C878 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Uba3Q8C878 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uba3Q8C878 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Uba3Q8C878 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uba3Q8C878 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uba3Q8C878 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uba3Q8C878 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uba3Q8C878 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.73■■□□□ 1.07
Uba3Q8C878 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uba3Q8C878 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.72■■□□□ 1.07
Uba3Q8C878 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Uba3Q8C878 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uba3Q8C878 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Uba3Q8C878 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Uba3Q8C878 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uba3Q8C878 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Uba3Q8C878 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uba3Q8C878 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Uba3Q8C878 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Uba3Q8C878 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.71■■□□□ 1.07
Uba3Q8C878 Gm22238-201ENSMUST00000175222 88 ntBASIC21.71■■□□□ 1.07
Uba3Q8C878 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.71■■□□□ 1.07
Uba3Q8C878 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uba3Q8C878 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Uba3Q8C878 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.71■■□□□ 1.07
Uba3Q8C878 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Uba3Q8C878 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Uba3Q8C878 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uba3Q8C878 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Uba3Q8C878 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Uba3Q8C878 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uba3Q8C878 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Uba3Q8C878 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uba3Q8C878 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uba3Q8C878 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Uba3Q8C878 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Uba3Q8C878 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Uba3Q8C878 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.7■■□□□ 1.06
Uba3Q8C878 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uba3Q8C878 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Uba3Q8C878 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Uba3Q8C878 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Uba3Q8C878 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Uba3Q8C878 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.69■■□□□ 1.06
Uba3Q8C878 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uba3Q8C878 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uba3Q8C878 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uba3Q8C878 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uba3Q8C878 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Uba3Q8C878 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uba3Q8C878 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Uba3Q8C878 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 122.6 ms