Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pabpc5Q8C7D3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pabpc5Q8C7D3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.65■□□□□ 0.9
Pabpc5Q8C7D3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pabpc5Q8C7D3 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.65■□□□□ 0.9
Pabpc5Q8C7D3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pabpc5Q8C7D3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Pabpc5Q8C7D3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pabpc5Q8C7D3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pabpc5Q8C7D3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pabpc5Q8C7D3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pabpc5Q8C7D3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.64■□□□□ 0.89
Pabpc5Q8C7D3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.64■□□□□ 0.89
Pabpc5Q8C7D3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pabpc5Q8C7D3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc5Q8C7D3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pabpc5Q8C7D3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pabpc5Q8C7D3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pabpc5Q8C7D3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Pabpc5Q8C7D3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.62■□□□□ 0.89
Pabpc5Q8C7D3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pabpc5Q8C7D3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pabpc5Q8C7D3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pabpc5Q8C7D3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Gm21956-201ENSMUST00000179946 522 ntBASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pabpc5Q8C7D3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc5Q8C7D3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc5Q8C7D3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc5Q8C7D3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc5Q8C7D3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc5Q8C7D3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc5Q8C7D3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Pabpc5Q8C7D3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pabpc5Q8C7D3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pabpc5Q8C7D3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pabpc5Q8C7D3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pabpc5Q8C7D3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.58■□□□□ 0.89
Pabpc5Q8C7D3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pabpc5Q8C7D3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.58■□□□□ 0.89
Pabpc5Q8C7D3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pabpc5Q8C7D3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pabpc5Q8C7D3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pabpc5Q8C7D3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Gm22238-201ENSMUST00000175222 88 ntBASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc5Q8C7D3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc5Q8C7D3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pabpc5Q8C7D3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pabpc5Q8C7D3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pabpc5Q8C7D3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms