Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Brat1Q8C3R1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Brat1Q8C3R1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Brat1Q8C3R1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Brat1Q8C3R1 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.83■■□□□ 1.08
Brat1Q8C3R1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Brat1Q8C3R1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Brat1Q8C3R1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Brat1Q8C3R1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Brat1Q8C3R1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Brat1Q8C3R1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
Brat1Q8C3R1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Brat1Q8C3R1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Brat1Q8C3R1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brat1Q8C3R1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Brat1Q8C3R1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Brat1Q8C3R1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brat1Q8C3R1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Brat1Q8C3R1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brat1Q8C3R1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.8■■□□□ 1.08
Brat1Q8C3R1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Gm9870-201ENSMUST00000063874 645 ntBASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brat1Q8C3R1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Brat1Q8C3R1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Brat1Q8C3R1 Gm7143-201ENSMUST00000222811 859 ntBASIC21.79■■□□□ 1.08
Brat1Q8C3R1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Brat1Q8C3R1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Brat1Q8C3R1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.78■■□□□ 1.08
Brat1Q8C3R1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.78■■□□□ 1.08
Brat1Q8C3R1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Brat1Q8C3R1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.78■■□□□ 1.08
Brat1Q8C3R1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Brat1Q8C3R1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Brat1Q8C3R1 Gm12922-201ENSMUST00000120626 809 ntBASIC21.77■■□□□ 1.08
Brat1Q8C3R1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Brat1Q8C3R1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Brat1Q8C3R1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Brat1Q8C3R1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Brat1Q8C3R1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.76■■□□□ 1.07
Brat1Q8C3R1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Brat1Q8C3R1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Brat1Q8C3R1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Brat1Q8C3R1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Brat1Q8C3R1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Brat1Q8C3R1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Brat1Q8C3R1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Brat1Q8C3R1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.75■■□□□ 1.07
Brat1Q8C3R1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Brat1Q8C3R1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Brat1Q8C3R1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brat1Q8C3R1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
Brat1Q8C3R1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brat1Q8C3R1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brat1Q8C3R1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brat1Q8C3R1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Brat1Q8C3R1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brat1Q8C3R1 Gm9847-201ENSMUST00000052528 599 ntBASIC21.74■■□□□ 1.07
Brat1Q8C3R1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brat1Q8C3R1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brat1Q8C3R1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brat1Q8C3R1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brat1Q8C3R1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
Brat1Q8C3R1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms