Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3rf3Q8C120 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3rf3Q8C120 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.52■■□□□ 1.04
Sh3rf3Q8C120 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sh3rf3Q8C120 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3rf3Q8C120 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3rf3Q8C120 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf3Q8C120 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sh3rf3Q8C120 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Sh3rf3Q8C120 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.51■■□□□ 1.03
Sh3rf3Q8C120 Gm15820-201ENSMUST00000201566 728 ntBASIC21.51■■□□□ 1.03
Sh3rf3Q8C120 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf3Q8C120 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf3Q8C120 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf3Q8C120 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf3Q8C120 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.49■■□□□ 1.03
Sh3rf3Q8C120 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf3Q8C120 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf3Q8C120 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf3Q8C120 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf3Q8C120 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf3Q8C120 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf3Q8C120 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3rf3Q8C120 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.46■■□□□ 1.03
Sh3rf3Q8C120 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.46■■□□□ 1.03
Sh3rf3Q8C120 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.46■■□□□ 1.03
Sh3rf3Q8C120 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3rf3Q8C120 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3rf3Q8C120 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3rf3Q8C120 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3rf3Q8C120 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Sh3rf3Q8C120 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.45■■□□□ 1.02
Sh3rf3Q8C120 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.45■■□□□ 1.02
Sh3rf3Q8C120 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3rf3Q8C120 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3rf3Q8C120 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3rf3Q8C120 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.44■■□□□ 1.02
Sh3rf3Q8C120 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3rf3Q8C120 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3rf3Q8C120 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3rf3Q8C120 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3rf3Q8C120 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3rf3Q8C120 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3rf3Q8C120 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Sh3rf3Q8C120 Gm15546-201ENSMUST00000122095 826 ntBASIC21.43■■□□□ 1.02
Sh3rf3Q8C120 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Sh3rf3Q8C120 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3rf3Q8C120 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3rf3Q8C120 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.42■■□□□ 1.02
Sh3rf3Q8C120 Gm10399-202ENSMUST00000202768 748 ntBASIC21.42■■□□□ 1.02
Sh3rf3Q8C120 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sh3rf3Q8C120 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms