Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim35Q8C006 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.83■□□□□ 0.93
Trim35Q8C006 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim35Q8C006 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim35Q8C006 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim35Q8C006 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim35Q8C006 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim35Q8C006 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim35Q8C006 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim35Q8C006 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim35Q8C006 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim35Q8C006 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim35Q8C006 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim35Q8C006 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim35Q8C006 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim35Q8C006 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim35Q8C006 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim35Q8C006 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim35Q8C006 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.81■□□□□ 0.92
Trim35Q8C006 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim35Q8C006 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Trim35Q8C006 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim35Q8C006 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim35Q8C006 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim35Q8C006 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim35Q8C006 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim35Q8C006 Gm44645-201ENSMUST00000205492 1653 ntBASIC20.8■□□□□ 0.92
Trim35Q8C006 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim35Q8C006 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim35Q8C006 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim35Q8C006 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim35Q8C006 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim35Q8C006 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim35Q8C006 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim35Q8C006 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim35Q8C006 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim35Q8C006 Gm15626-201ENSMUST00000117478 868 ntBASIC20.78■□□□□ 0.92
Trim35Q8C006 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim35Q8C006 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim35Q8C006 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim35Q8C006 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim35Q8C006 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Trim35Q8C006 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim35Q8C006 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.78■□□□□ 0.92
Trim35Q8C006 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim35Q8C006 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim35Q8C006 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim35Q8C006 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim35Q8C006 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim35Q8C006 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
Trim35Q8C006 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim35Q8C006 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trim35Q8C006 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Trim35Q8C006 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim35Q8C006 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.77■□□□□ 0.92
Trim35Q8C006 Gm45102-201ENSMUST00000207427 857 ntBASIC20.77■□□□□ 0.92
Trim35Q8C006 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.77■□□□□ 0.92
Trim35Q8C006 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim35Q8C006 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Trim35Q8C006 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Rps24-207ENSMUST00000224568 714 ntBASIC20.76■□□□□ 0.91
Trim35Q8C006 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim35Q8C006 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.76■□□□□ 0.91
Trim35Q8C006 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim35Q8C006 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim35Q8C006 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim35Q8C006 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim35Q8C006 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim35Q8C006 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim35Q8C006 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim35Q8C006 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim35Q8C006 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim35Q8C006 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.75■□□□□ 0.91
Trim35Q8C006 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim35Q8C006 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim35Q8C006 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim35Q8C006 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim35Q8C006 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim35Q8C006 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Trim35Q8C006 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim35Q8C006 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim35Q8C006 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim35Q8C006 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim35Q8C006 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim35Q8C006 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim35Q8C006 CT009764.1-201ENSMUST00000222260 483 ntBASIC20.73■□□□□ 0.91
Trim35Q8C006 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC20.73■□□□□ 0.91
Trim35Q8C006 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim35Q8C006 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim35Q8C006 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Trim35Q8C006 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Trim35Q8C006 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim35Q8C006 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms