Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Gm5786-201ENSMUST00000085368 882 ntBASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Iqck-206ENSMUST00000208658 2891 ntBASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf7Q8BTV2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf7Q8BTV2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf7Q8BTV2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf7Q8BTV2 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.67■□□□□ 0.9
Cpsf7Q8BTV2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cpsf7Q8BTV2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cpsf7Q8BTV2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf7Q8BTV2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf7Q8BTV2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cpsf7Q8BTV2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf7Q8BTV2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf7Q8BTV2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf7Q8BTV2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf7Q8BTV2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf7Q8BTV2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cpsf7Q8BTV2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf7Q8BTV2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.65■□□□□ 0.9
Cpsf7Q8BTV2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf7Q8BTV2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf7Q8BTV2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.65■□□□□ 0.9
Cpsf7Q8BTV2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cpsf7Q8BTV2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf7Q8BTV2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf7Q8BTV2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf7Q8BTV2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf7Q8BTV2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf7Q8BTV2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cpsf7Q8BTV2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf7Q8BTV2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf7Q8BTV2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf7Q8BTV2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf7Q8BTV2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf7Q8BTV2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.63■□□□□ 0.89
Cpsf7Q8BTV2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cpsf7Q8BTV2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf7Q8BTV2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cpsf7Q8BTV2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cpsf7Q8BTV2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf7Q8BTV2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cpsf7Q8BTV2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf7Q8BTV2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.59■□□□□ 0.89
Cpsf7Q8BTV2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf7Q8BTV2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf7Q8BTV2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf7Q8BTV2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cpsf7Q8BTV2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms