Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Csnk1a1Q8BK63 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.38■□□□□ 0.53
Csnk1a1Q8BK63 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.38■□□□□ 0.53
Csnk1a1Q8BK63 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Csnk1a1Q8BK63 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Csnk1a1Q8BK63 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Csnk1a1Q8BK63 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Csnk1a1Q8BK63 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Csnk1a1Q8BK63 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Csnk1a1Q8BK63 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.36■□□□□ 0.53
Csnk1a1Q8BK63 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.36■□□□□ 0.53
Csnk1a1Q8BK63 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Csnk1a1Q8BK63 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Csnk1a1Q8BK63 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Csnk1a1Q8BK63 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Csnk1a1Q8BK63 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Gm15546-201ENSMUST00000122095 826 ntBASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Csnk1a1Q8BK63 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.33■□□□□ 0.53
Csnk1a1Q8BK63 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Csnk1a1Q8BK63 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Csnk1a1Q8BK63 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Csnk1a1Q8BK63 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Csnk1a1Q8BK63 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Csnk1a1Q8BK63 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Csnk1a1Q8BK63 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Csnk1a1Q8BK63 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Csnk1a1Q8BK63 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Csnk1a1Q8BK63 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Csnk1a1Q8BK63 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Csnk1a1Q8BK63 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Csnk1a1Q8BK63 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Csnk1a1Q8BK63 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Csnk1a1Q8BK63 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Csnk1a1Q8BK63 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Csnk1a1Q8BK63 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Csnk1a1Q8BK63 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Csnk1a1Q8BK63 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Csnk1a1Q8BK63 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Csnk1a1Q8BK63 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Csnk1a1Q8BK63 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Csnk1a1Q8BK63 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.28■□□□□ 0.52
Csnk1a1Q8BK63 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Csnk1a1Q8BK63 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Csnk1a1Q8BK63 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Csnk1a1Q8BK63 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Csnk1a1Q8BK63 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Csnk1a1Q8BK63 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Csnk1a1Q8BK63 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.27■□□□□ 0.52
Csnk1a1Q8BK63 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.27■□□□□ 0.52
Csnk1a1Q8BK63 Gm40881-201ENSMUST00000223397 166 ntBASIC18.27■□□□□ 0.52
Csnk1a1Q8BK63 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms