Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trnp1Q80ZI1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trnp1Q80ZI1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trnp1Q80ZI1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.78■■□□□ 1.4
Trnp1Q80ZI1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trnp1Q80ZI1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Trnp1Q80ZI1 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.78■■□□□ 1.4
Trnp1Q80ZI1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trnp1Q80ZI1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trnp1Q80ZI1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trnp1Q80ZI1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trnp1Q80ZI1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trnp1Q80ZI1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Trnp1Q80ZI1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Trnp1Q80ZI1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trnp1Q80ZI1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trnp1Q80ZI1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trnp1Q80ZI1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Trnp1Q80ZI1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trnp1Q80ZI1 Gm43530-201ENSMUST00000195920 274 ntBASIC23.76■■□□□ 1.39
Trnp1Q80ZI1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trnp1Q80ZI1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trnp1Q80ZI1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trnp1Q80ZI1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trnp1Q80ZI1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trnp1Q80ZI1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Trnp1Q80ZI1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trnp1Q80ZI1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.74■■□□□ 1.39
Trnp1Q80ZI1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trnp1Q80ZI1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Trnp1Q80ZI1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Trnp1Q80ZI1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trnp1Q80ZI1 Gm40848-201ENSMUST00000221998 324 ntBASIC23.73■■□□□ 1.39
Trnp1Q80ZI1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trnp1Q80ZI1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trnp1Q80ZI1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.72■■□□□ 1.39
Trnp1Q80ZI1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trnp1Q80ZI1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trnp1Q80ZI1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.71■■□□□ 1.39
Trnp1Q80ZI1 Gm27011-201ENSMUST00000182352 972 ntBASIC23.71■■□□□ 1.39
Trnp1Q80ZI1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trnp1Q80ZI1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trnp1Q80ZI1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trnp1Q80ZI1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trnp1Q80ZI1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trnp1Q80ZI1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trnp1Q80ZI1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.7■■□□□ 1.38
Trnp1Q80ZI1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.7■■□□□ 1.38
Trnp1Q80ZI1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Trnp1Q80ZI1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Trnp1Q80ZI1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trnp1Q80ZI1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.69■■□□□ 1.38
Trnp1Q80ZI1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.69■■□□□ 1.38
Trnp1Q80ZI1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trnp1Q80ZI1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Trnp1Q80ZI1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trnp1Q80ZI1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trnp1Q80ZI1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.68■■□□□ 1.38
Trnp1Q80ZI1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trnp1Q80ZI1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trnp1Q80ZI1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trnp1Q80ZI1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trnp1Q80ZI1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trnp1Q80ZI1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trnp1Q80ZI1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trnp1Q80ZI1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Trnp1Q80ZI1 Smad6-203ENSMUST00000179458 273 ntBASIC23.66■■□□□ 1.38
Trnp1Q80ZI1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.66■■□□□ 1.38
Trnp1Q80ZI1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trnp1Q80ZI1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trnp1Q80ZI1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trnp1Q80ZI1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.64■■□□□ 1.37
Trnp1Q80ZI1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trnp1Q80ZI1 Gm10033-202ENSMUST00000211874 928 ntBASIC23.63■■□□□ 1.37
Trnp1Q80ZI1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.63■■□□□ 1.37
Trnp1Q80ZI1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trnp1Q80ZI1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trnp1Q80ZI1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Trnp1Q80ZI1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trnp1Q80ZI1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trnp1Q80ZI1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trnp1Q80ZI1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
Trnp1Q80ZI1 Gm18671-201ENSMUST00000214826 683 ntBASIC23.62■■□□□ 1.37
Trnp1Q80ZI1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Trnp1Q80ZI1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trnp1Q80ZI1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trnp1Q80ZI1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trnp1Q80ZI1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trnp1Q80ZI1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trnp1Q80ZI1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trnp1Q80ZI1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trnp1Q80ZI1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms