Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nucks1Q80XU3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Nucks1Q80XU3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.09■■□□□ 1.13
Nucks1Q80XU3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nucks1Q80XU3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nucks1Q80XU3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Nucks1Q80XU3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Nucks1Q80XU3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Nucks1Q80XU3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nucks1Q80XU3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nucks1Q80XU3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.08■■□□□ 1.13
Nucks1Q80XU3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.08■■□□□ 1.13
Nucks1Q80XU3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.08■■□□□ 1.13
Nucks1Q80XU3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Nucks1Q80XU3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nucks1Q80XU3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nucks1Q80XU3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nucks1Q80XU3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nucks1Q80XU3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nucks1Q80XU3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nucks1Q80XU3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nucks1Q80XU3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nucks1Q80XU3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Nucks1Q80XU3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Nucks1Q80XU3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nucks1Q80XU3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nucks1Q80XU3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nucks1Q80XU3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Nucks1Q80XU3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.06■■□□□ 1.12
Nucks1Q80XU3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Nucks1Q80XU3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Nucks1Q80XU3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nucks1Q80XU3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Nucks1Q80XU3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nucks1Q80XU3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nucks1Q80XU3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nucks1Q80XU3 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.03■■□□□ 1.12
Nucks1Q80XU3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nucks1Q80XU3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.03■■□□□ 1.12
Nucks1Q80XU3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nucks1Q80XU3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nucks1Q80XU3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
Nucks1Q80XU3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Nucks1Q80XU3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nucks1Q80XU3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nucks1Q80XU3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Nucks1Q80XU3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Nucks1Q80XU3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.02■■□□□ 1.12
Nucks1Q80XU3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nucks1Q80XU3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nucks1Q80XU3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22■■□□□ 1.11
Nucks1Q80XU3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nucks1Q80XU3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22■■□□□ 1.11
Nucks1Q80XU3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Nucks1Q80XU3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nucks1Q80XU3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nucks1Q80XU3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nucks1Q80XU3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nucks1Q80XU3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Nucks1Q80XU3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nucks1Q80XU3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms