Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Usp8Q80U87 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp8Q80U87 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.57■□□□□ 0.88
Usp8Q80U87 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp8Q80U87 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp8Q80U87 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp8Q80U87 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp8Q80U87 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Usp8Q80U87 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.57■□□□□ 0.88
Usp8Q80U87 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp8Q80U87 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp8Q80U87 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Usp8Q80U87 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp8Q80U87 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Usp8Q80U87 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.56■□□□□ 0.88
Usp8Q80U87 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp8Q80U87 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp8Q80U87 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp8Q80U87 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Usp8Q80U87 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp8Q80U87 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Usp8Q80U87 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp8Q80U87 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp8Q80U87 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp8Q80U87 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Usp8Q80U87 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp8Q80U87 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Usp8Q80U87 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Usp8Q80U87 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Usp8Q80U87 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp8Q80U87 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.54■□□□□ 0.88
Usp8Q80U87 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp8Q80U87 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp8Q80U87 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp8Q80U87 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp8Q80U87 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp8Q80U87 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp8Q80U87 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.53■□□□□ 0.88
Usp8Q80U87 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp8Q80U87 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp8Q80U87 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp8Q80U87 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp8Q80U87 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Usp8Q80U87 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Usp8Q80U87 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.52■□□□□ 0.88
Usp8Q80U87 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp8Q80U87 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp8Q80U87 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp8Q80U87 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp8Q80U87 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.51■□□□□ 0.87
Usp8Q80U87 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.51■□□□□ 0.87
Usp8Q80U87 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp8Q80U87 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp8Q80U87 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp8Q80U87 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Usp8Q80U87 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp8Q80U87 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp8Q80U87 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp8Q80U87 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp8Q80U87 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp8Q80U87 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp8Q80U87 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp8Q80U87 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp8Q80U87 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp8Q80U87 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp8Q80U87 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Usp8Q80U87 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Usp8Q80U87 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.5■□□□□ 0.87
Usp8Q80U87 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp8Q80U87 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Usp8Q80U87 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Usp8Q80U87 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp8Q80U87 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Usp8Q80U87 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Usp8Q80U87 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.49■□□□□ 0.87
Usp8Q80U87 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp8Q80U87 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.48■□□□□ 0.87
Usp8Q80U87 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Usp8Q80U87 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms