Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Lsm8Q6ZWM4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Lsm8Q6ZWM4 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.75■■□□□ 1.07
Lsm8Q6ZWM4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Lsm8Q6ZWM4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm8Q6ZWM4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Lsm8Q6ZWM4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm8Q6ZWM4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.74■■□□□ 1.07
Lsm8Q6ZWM4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
Lsm8Q6ZWM4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.74■■□□□ 1.07
Lsm8Q6ZWM4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm8Q6ZWM4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm8Q6ZWM4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Lsm8Q6ZWM4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm8Q6ZWM4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm8Q6ZWM4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm8Q6ZWM4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.71■■□□□ 1.07
Lsm8Q6ZWM4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm8Q6ZWM4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm8Q6ZWM4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Lsm8Q6ZWM4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Lsm8Q6ZWM4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm8Q6ZWM4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm8Q6ZWM4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.71■■□□□ 1.07
Lsm8Q6ZWM4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm8Q6ZWM4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm8Q6ZWM4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm8Q6ZWM4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Lsm8Q6ZWM4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm8Q6ZWM4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm8Q6ZWM4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm8Q6ZWM4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm8Q6ZWM4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm8Q6ZWM4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm8Q6ZWM4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm8Q6ZWM4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.67■■□□□ 1.06
Lsm8Q6ZWM4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.67■■□□□ 1.06
Lsm8Q6ZWM4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm8Q6ZWM4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm8Q6ZWM4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm8Q6ZWM4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm8Q6ZWM4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm8Q6ZWM4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm8Q6ZWM4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm8Q6ZWM4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Lsm8Q6ZWM4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.66■■□□□ 1.06
Lsm8Q6ZWM4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm8Q6ZWM4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.65■■□□□ 1.06
Lsm8Q6ZWM4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.65■■□□□ 1.06
Lsm8Q6ZWM4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm8Q6ZWM4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Lsm8Q6ZWM4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm8Q6ZWM4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm8Q6ZWM4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.64■■□□□ 1.06
Lsm8Q6ZWM4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lsm8Q6ZWM4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm8Q6ZWM4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.64■■□□□ 1.05
Lsm8Q6ZWM4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.64■■□□□ 1.05
Lsm8Q6ZWM4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm8Q6ZWM4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.64■■□□□ 1.05
Lsm8Q6ZWM4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm8Q6ZWM4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms