Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.06■□□□□ 0.96
PTCHD4Q6ZW05 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCHD4Q6ZW05 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.04■□□□□ 0.96
PTCHD4Q6ZW05 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCHD4Q6ZW05 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCHD4Q6ZW05 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCHD4Q6ZW05 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.04■□□□□ 0.96
PTCHD4Q6ZW05 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.04■□□□□ 0.96
PTCHD4Q6ZW05 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCHD4Q6ZW05 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 AC009831.1-201ENST00000580420 1582 ntBASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.03■□□□□ 0.96
PTCHD4Q6ZW05 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 AL117328.2-201ENST00000624617 1940 ntBASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 CLDN5-201ENST00000403084 2357 ntBASIC21.02■□□□□ 0.96
PTCHD4Q6ZW05 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.02■□□□□ 0.95
PTCHD4Q6ZW05 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCHD4Q6ZW05 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCHD4Q6ZW05 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTCHD4Q6ZW05 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.01■□□□□ 0.95
PTCHD4Q6ZW05 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTCHD4Q6ZW05 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCHD4Q6ZW05 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCHD4Q6ZW05 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTCHD4Q6ZW05 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTCHD4Q6ZW05 HES4-204ENST00000484667 667 ntTSL 3 BASIC21■□□□□ 0.95
PTCHD4Q6ZW05 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21■□□□□ 0.95
PTCHD4Q6ZW05 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PTCHD4Q6ZW05 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCHD4Q6ZW05 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTCHD4Q6ZW05 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 AC133552.2-201ENST00000619106 1032 ntBASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 RNF126P1-201ENST00000567452 1320 ntBASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCHD4Q6ZW05 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCHD4Q6ZW05 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCHD4Q6ZW05 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PTCHD4Q6ZW05 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
PTCHD4Q6ZW05 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.98■□□□□ 0.95
PTCHD4Q6ZW05 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCHD4Q6ZW05 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTCHD4Q6ZW05 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCHD4Q6ZW05 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 FOXO3B-201ENST00000395675 1928 ntBASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.97■□□□□ 0.95
PTCHD4Q6ZW05 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.96■□□□□ 0.95
PTCHD4Q6ZW05 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.96■□□□□ 0.95
PTCHD4Q6ZW05 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTCHD4Q6ZW05 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCHD4Q6ZW05 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.96■□□□□ 0.95
PTCHD4Q6ZW05 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCHD4Q6ZW05 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PTCHD4Q6ZW05 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PTCHD4Q6ZW05 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms