Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Gm40881-201ENSMUST00000223397 166 ntBASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Casc4Q6P2L7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc4Q6P2L7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Casc4Q6P2L7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Casc4Q6P2L7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Casc4Q6P2L7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.87■□□□□ 0.93
Casc4Q6P2L7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.86■□□□□ 0.93
Casc4Q6P2L7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.86■□□□□ 0.93
Casc4Q6P2L7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc4Q6P2L7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc4Q6P2L7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc4Q6P2L7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.85■□□□□ 0.93
Casc4Q6P2L7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.85■□□□□ 0.93
Casc4Q6P2L7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc4Q6P2L7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc4Q6P2L7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc4Q6P2L7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Gm7417-201ENSMUST00000192950 473 ntBASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc4Q6P2L7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Casc4Q6P2L7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Casc4Q6P2L7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc4Q6P2L7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc4Q6P2L7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.82■□□□□ 0.92
Casc4Q6P2L7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc4Q6P2L7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc4Q6P2L7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc4Q6P2L7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc4Q6P2L7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Casc4Q6P2L7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc4Q6P2L7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Casc4Q6P2L7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.8■□□□□ 0.92
Casc4Q6P2L7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.8■□□□□ 0.92
Casc4Q6P2L7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Casc4Q6P2L7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc4Q6P2L7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc4Q6P2L7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.79■□□□□ 0.92
Casc4Q6P2L7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc4Q6P2L7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Casc4Q6P2L7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc4Q6P2L7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.79■□□□□ 0.92
Casc4Q6P2L7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Casc4Q6P2L7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc4Q6P2L7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc4Q6P2L7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc4Q6P2L7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Casc4Q6P2L7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Casc4Q6P2L7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Casc4Q6P2L7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Casc4Q6P2L7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.78■□□□□ 0.92
Casc4Q6P2L7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Casc4Q6P2L7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Casc4Q6P2L7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc4Q6P2L7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Casc4Q6P2L7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.77■□□□□ 0.92
Casc4Q6P2L7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc4Q6P2L7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Casc4Q6P2L7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Casc4Q6P2L7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Casc4Q6P2L7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc4Q6P2L7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc4Q6P2L7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Casc4Q6P2L7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Casc4Q6P2L7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms