Protein–RNA interactions for Protein: Q6NXZ1

Krba1, Protein KRBA1, mousemouse

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krba1Q6NXZ1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Krba1Q6NXZ1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krba1Q6NXZ1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Krba1Q6NXZ1 Gm26833-201ENSMUST00000180899 440 ntBASIC21.36■■□□□ 1.01
Krba1Q6NXZ1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.36■■□□□ 1.01
Krba1Q6NXZ1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krba1Q6NXZ1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krba1Q6NXZ1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krba1Q6NXZ1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krba1Q6NXZ1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krba1Q6NXZ1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krba1Q6NXZ1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Krba1Q6NXZ1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
Krba1Q6NXZ1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 Spcs1-204ENSMUST00000226782 949 ntBASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Krba1Q6NXZ1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krba1Q6NXZ1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Krba1Q6NXZ1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.33■■□□□ 1.01
Krba1Q6NXZ1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Krba1Q6NXZ1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Krba1Q6NXZ1 Gm10493-201ENSMUST00000097270 612 ntBASIC21.33■■□□□ 1.01
Krba1Q6NXZ1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Krba1Q6NXZ1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Krba1Q6NXZ1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Krba1Q6NXZ1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.32■■□□□ 1
Krba1Q6NXZ1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.32■■□□□ 1
Krba1Q6NXZ1 Gm43060-201ENSMUST00000200621 289 ntBASIC21.32■■□□□ 1
Krba1Q6NXZ1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.32■■□□□ 1
Krba1Q6NXZ1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Krba1Q6NXZ1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Krba1Q6NXZ1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.32■■□□□ 1
Krba1Q6NXZ1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
Krba1Q6NXZ1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
Krba1Q6NXZ1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.31■■□□□ 1
Krba1Q6NXZ1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Gm27405-201ENSMUST00000184201 112 ntBASIC21.3■■□□□ 1
Krba1Q6NXZ1 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.3■■□□□ 1
Krba1Q6NXZ1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Krba1Q6NXZ1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Krba1Q6NXZ1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Krba1Q6NXZ1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Krba1Q6NXZ1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Krba1Q6NXZ1 Gm42569-201ENSMUST00000200539 472 ntBASIC21.29■■□□□ 1
Krba1Q6NXZ1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.29■■□□□ 1
Krba1Q6NXZ1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Krba1Q6NXZ1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.28■■□□□ 1
Krba1Q6NXZ1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krba1Q6NXZ1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.28■■□□□ 1
Krba1Q6NXZ1 Gm43530-201ENSMUST00000195920 274 ntBASIC21.28■■□□□ 1
Krba1Q6NXZ1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krba1Q6NXZ1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krba1Q6NXZ1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krba1Q6NXZ1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krba1Q6NXZ1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Krba1Q6NXZ1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krba1Q6NXZ1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krba1Q6NXZ1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krba1Q6NXZ1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.27■■□□□ 1
Krba1Q6NXZ1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Krba1Q6NXZ1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krba1Q6NXZ1 Gm10849-201ENSMUST00000100397 618 ntBASIC21.25■□□□□ 0.99
Krba1Q6NXZ1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krba1Q6NXZ1 Gm42642-201ENSMUST00000200683 355 ntBASIC21.25■□□□□ 0.99
Krba1Q6NXZ1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.25■□□□□ 0.99
Krba1Q6NXZ1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krba1Q6NXZ1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Krba1Q6NXZ1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
Krba1Q6NXZ1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Krba1Q6NXZ1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Krba1Q6NXZ1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Krba1Q6NXZ1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Krba1Q6NXZ1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Krba1Q6NXZ1 Gm40848-201ENSMUST00000221998 324 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms