Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
VcanQ62059 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.84■□□□□ 0.77
VcanQ62059 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
VcanQ62059 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VcanQ62059 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VcanQ62059 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VcanQ62059 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
VcanQ62059 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VcanQ62059 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VcanQ62059 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VcanQ62059 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VcanQ62059 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VcanQ62059 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VcanQ62059 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.82■□□□□ 0.76
VcanQ62059 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VcanQ62059 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VcanQ62059 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
VcanQ62059 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VcanQ62059 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VcanQ62059 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VcanQ62059 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VcanQ62059 Gm40848-201ENSMUST00000221998 324 ntBASIC19.81■□□□□ 0.76
VcanQ62059 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
VcanQ62059 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
VcanQ62059 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VcanQ62059 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VcanQ62059 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VcanQ62059 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.81■□□□□ 0.76
VcanQ62059 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 Gm22240-201ENSMUST00000175225 82 ntBASIC19.8■□□□□ 0.76
VcanQ62059 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.8■□□□□ 0.76
VcanQ62059 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VcanQ62059 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.8■□□□□ 0.76
VcanQ62059 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcanQ62059 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcanQ62059 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.79■□□□□ 0.76
VcanQ62059 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcanQ62059 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VcanQ62059 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VcanQ62059 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcanQ62059 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
VcanQ62059 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.78■□□□□ 0.76
VcanQ62059 Gm12527-201ENSMUST00000117967 564 ntBASIC19.78■□□□□ 0.76
VcanQ62059 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcanQ62059 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcanQ62059 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcanQ62059 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcanQ62059 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
VcanQ62059 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VcanQ62059 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.77■□□□□ 0.75
VcanQ62059 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VcanQ62059 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
VcanQ62059 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VcanQ62059 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VcanQ62059 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VcanQ62059 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VcanQ62059 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VcanQ62059 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.76■□□□□ 0.75
VcanQ62059 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VcanQ62059 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.76■□□□□ 0.75
VcanQ62059 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VcanQ62059 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VcanQ62059 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VcanQ62059 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.75■□□□□ 0.75
VcanQ62059 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VcanQ62059 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.75■□□□□ 0.75
VcanQ62059 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.75■□□□□ 0.75
VcanQ62059 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VcanQ62059 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcanQ62059 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcanQ62059 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcanQ62059 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VcanQ62059 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcanQ62059 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcanQ62059 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.74■□□□□ 0.75
VcanQ62059 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VcanQ62059 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
VcanQ62059 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcanQ62059 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VcanQ62059 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.73■□□□□ 0.75
VcanQ62059 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VcanQ62059 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms