Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 MIR3960-201ENST00000583311 91 ntBASIC18.12■□□□□ 0.49
FAM78BQ5VT40 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FAM78BQ5VT40 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM78BQ5VT40 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM78BQ5VT40 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM78BQ5VT40 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FAM78BQ5VT40 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FAM78BQ5VT40 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FAM78BQ5VT40 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FAM78BQ5VT40 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM78BQ5VT40 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM78BQ5VT40 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
FAM78BQ5VT40 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 AC025884.2-201ENST00000553429 711 ntBASIC18.07■□□□□ 0.48
FAM78BQ5VT40 AC060814.1-201ENST00000554326 538 ntBASIC18.07■□□□□ 0.48
FAM78BQ5VT40 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 LINC00565-201ENST00000562710 2331 ntBASIC18.07■□□□□ 0.48
FAM78BQ5VT40 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM78BQ5VT40 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 MIR4449-201ENST00000578365 66 ntBASIC18.06■□□□□ 0.48
FAM78BQ5VT40 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
FAM78BQ5VT40 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms