Protein–RNA interactions for Protein: Q5JS37

NHLRC3, NHL repeat-containing protein 3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3Q5JS37 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.71■□□□□ 0.75
NHLRC3Q5JS37 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 RPS2P7-201ENST00000447334 885 ntBASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC3Q5JS37 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 AC004812.2-201ENST00000611079 2094 ntBASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NHLRC3Q5JS37 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC3Q5JS37 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 AC018755.3-202ENST00000596210 929 ntBASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NHLRC3Q5JS37 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC3Q5JS37 EP400NL-214ENST00000641289 2402 ntBASIC19.66■□□□□ 0.74
NHLRC3Q5JS37 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC3Q5JS37 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.66■□□□□ 0.74
NHLRC3Q5JS37 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC3Q5JS37 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NHLRC3Q5JS37 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC3Q5JS37 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 SLC25A24-204ENST00000569674 2357 ntBASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NHLRC3Q5JS37 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.64■□□□□ 0.73
NHLRC3Q5JS37 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NHLRC3Q5JS37 AL592293.1-201ENST00000502889 1188 ntBASIC19.64■□□□□ 0.73
NHLRC3Q5JS37 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.64■□□□□ 0.73
NHLRC3Q5JS37 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.64■□□□□ 0.73
NHLRC3Q5JS37 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NHLRC3Q5JS37 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NHLRC3Q5JS37 C1orf229-201ENST00000623686 2258 ntBASIC19.64■□□□□ 0.73
NHLRC3Q5JS37 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NHLRC3Q5JS37 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NHLRC3Q5JS37 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NHLRC3Q5JS37 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.63■□□□□ 0.73
NHLRC3Q5JS37 AC087393.1-201ENST00000582896 145 ntBASIC19.63■□□□□ 0.73
NHLRC3Q5JS37 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NHLRC3Q5JS37 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms