Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brf2Q3UAW9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brf2Q3UAW9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brf2Q3UAW9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brf2Q3UAW9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brf2Q3UAW9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.45■□□□□ 0.7
Brf2Q3UAW9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brf2Q3UAW9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brf2Q3UAW9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Brf2Q3UAW9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Brf2Q3UAW9 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.45■□□□□ 0.7
Brf2Q3UAW9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Brf2Q3UAW9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Brf2Q3UAW9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Brf2Q3UAW9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.44■□□□□ 0.7
Brf2Q3UAW9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf2Q3UAW9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf2Q3UAW9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Gm10232-201ENSMUST00000089221 720 ntBASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf2Q3UAW9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.4■□□□□ 0.7
Brf2Q3UAW9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf2Q3UAW9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Brf2Q3UAW9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Brf2Q3UAW9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Brf2Q3UAW9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Brf2Q3UAW9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf2Q3UAW9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Brf2Q3UAW9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Brf2Q3UAW9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.38■□□□□ 0.69
Brf2Q3UAW9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brf2Q3UAW9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.38■□□□□ 0.69
Brf2Q3UAW9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brf2Q3UAW9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brf2Q3UAW9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.38■□□□□ 0.69
Brf2Q3UAW9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brf2Q3UAW9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brf2Q3UAW9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brf2Q3UAW9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brf2Q3UAW9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brf2Q3UAW9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brf2Q3UAW9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.37■□□□□ 0.69
Brf2Q3UAW9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brf2Q3UAW9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.37■□□□□ 0.69
Brf2Q3UAW9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brf2Q3UAW9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms