Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC30.35■■■□□ 2.45
Xrn1P97789 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Xrn1P97789 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Xrn1P97789 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Xrn1P97789 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Xrn1P97789 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Xrn1P97789 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Xrn1P97789 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
Xrn1P97789 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Xrn1P97789 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC30.33■■■□□ 2.45
Xrn1P97789 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Xrn1P97789 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Xrn1P97789 Gm10493-201ENSMUST00000097270 612 ntBASIC30.33■■■□□ 2.45
Xrn1P97789 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Xrn1P97789 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Xrn1P97789 Gm10129-202ENSMUST00000193100 1316 ntBASIC30.33■■■□□ 2.45
Xrn1P97789 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Xrn1P97789 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC30.33■■■□□ 2.45
Xrn1P97789 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
Xrn1P97789 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC30.33■■■□□ 2.45
Xrn1P97789 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
Xrn1P97789 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
Xrn1P97789 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Xrn1P97789 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Xrn1P97789 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Xrn1P97789 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Xrn1P97789 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Xrn1P97789 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Xrn1P97789 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC30.31■■■□□ 2.44
Xrn1P97789 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Xrn1P97789 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Xrn1P97789 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Xrn1P97789 AC099934.2-201ENSMUST00000196389 70 ntBASIC30.3■■■□□ 2.44
Xrn1P97789 AC156953.1-201ENSMUST00000196953 70 ntBASIC30.3■■■□□ 2.44
Xrn1P97789 AC157822.2-201ENSMUST00000200291 70 ntBASIC30.3■■■□□ 2.44
Xrn1P97789 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Xrn1P97789 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Xrn1P97789 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Xrn1P97789 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC30.3■■■□□ 2.44
Xrn1P97789 Gm37179-201ENSMUST00000194862 823 ntBASIC30.3■■■□□ 2.44
Xrn1P97789 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Xrn1P97789 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Xrn1P97789 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC30.29■■■□□ 2.44
Xrn1P97789 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Xrn1P97789 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Xrn1P97789 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Xrn1P97789 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Xrn1P97789 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC30.28■■■□□ 2.44
Xrn1P97789 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Xrn1P97789 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC30.28■■■□□ 2.44
Xrn1P97789 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC30.28■■■□□ 2.44
Xrn1P97789 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Xrn1P97789 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Xrn1P97789 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Xrn1P97789 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Xrn1P97789 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC30.26■■■□□ 2.44
Xrn1P97789 Gm27405-201ENSMUST00000184201 112 ntBASIC30.26■■■□□ 2.43
Xrn1P97789 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Xrn1P97789 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Gm27011-201ENSMUST00000182352 972 ntBASIC30.25■■■□□ 2.43
Xrn1P97789 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Xrn1P97789 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
Xrn1P97789 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Xrn1P97789 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Xrn1P97789 AC166356.1-201ENSMUST00000228236 1426 ntBASIC30.24■■■□□ 2.43
Xrn1P97789 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Xrn1P97789 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Xrn1P97789 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Xrn1P97789 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC30.23■■■□□ 2.43
Xrn1P97789 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Xrn1P97789 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Xrn1P97789 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Xrn1P97789 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC30.22■■■□□ 2.43
Xrn1P97789 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Xrn1P97789 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Xrn1P97789 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Xrn1P97789 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Xrn1P97789 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Xrn1P97789 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Xrn1P97789 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Xrn1P97789 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Xrn1P97789 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Xrn1P97789 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Xrn1P97789 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Xrn1P97789 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Xrn1P97789 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Xrn1P97789 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Xrn1P97789 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
Xrn1P97789 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Xrn1P97789 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC30.19■■■□□ 2.42
Xrn1P97789 Gm42569-201ENSMUST00000200539 472 ntBASIC30.19■■■□□ 2.42
Xrn1P97789 Gm10033-202ENSMUST00000211874 928 ntBASIC30.19■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms