Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf1P81269 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Atf1P81269 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Atf1P81269 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Atf1P81269 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf1P81269 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf1P81269 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Atf1P81269 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf1P81269 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Atf1P81269 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf1P81269 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atf1P81269 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.87■□□□□ 0.45
Atf1P81269 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.87■□□□□ 0.45
Atf1P81269 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.87■□□□□ 0.45
Atf1P81269 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf1P81269 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf1P81269 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf1P81269 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Atf1P81269 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf1P81269 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf1P81269 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf1P81269 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf1P81269 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.86■□□□□ 0.45
Atf1P81269 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.86■□□□□ 0.45
Atf1P81269 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Atf1P81269 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf1P81269 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf1P81269 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Atf1P81269 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Atf1P81269 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Atf1P81269 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Atf1P81269 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.85■□□□□ 0.45
Atf1P81269 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Atf1P81269 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf1P81269 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf1P81269 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf1P81269 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf1P81269 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf1P81269 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf1P81269 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf1P81269 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.85■□□□□ 0.45
Atf1P81269 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Atf1P81269 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Atf1P81269 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf1P81269 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.84■□□□□ 0.45
Atf1P81269 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf1P81269 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atf1P81269 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atf1P81269 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf1P81269 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf1P81269 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf1P81269 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Atf1P81269 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf1P81269 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf1P81269 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Atf1P81269 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Atf1P81269 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf1P81269 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Atf1P81269 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf1P81269 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.83■□□□□ 0.44
Atf1P81269 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.83■□□□□ 0.44
Atf1P81269 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atf1P81269 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf1P81269 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atf1P81269 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.82■□□□□ 0.44
Atf1P81269 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf1P81269 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf1P81269 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf1P81269 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.82■□□□□ 0.44
Atf1P81269 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf1P81269 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Atf1P81269 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.81■□□□□ 0.44
Atf1P81269 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.81■□□□□ 0.44
Atf1P81269 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Atf1P81269 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf1P81269 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf1P81269 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.8■□□□□ 0.44
Atf1P81269 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf1P81269 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Atf1P81269 Gm5921-201ENSMUST00000075898 882 ntBASIC17.8■□□□□ 0.44
Atf1P81269 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf1P81269 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms