Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tubgcp3P58854 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tubgcp3P58854 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tubgcp3P58854 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tubgcp3P58854 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tubgcp3P58854 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubgcp3P58854 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.07■□□□□ 0.96
Tubgcp3P58854 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tubgcp3P58854 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp3P58854 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp3P58854 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp3P58854 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp3P58854 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp3P58854 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tubgcp3P58854 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp3P58854 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Tubgcp3P58854 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp3P58854 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp3P58854 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp3P58854 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp3P58854 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp3P58854 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.04■□□□□ 0.96
Tubgcp3P58854 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp3P58854 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp3P58854 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Tubgcp3P58854 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp3P58854 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp3P58854 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp3P58854 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp3P58854 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp3P58854 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubgcp3P58854 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Tubgcp3P58854 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Tubgcp3P58854 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.01■□□□□ 0.95
Tubgcp3P58854 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.01■□□□□ 0.95
Tubgcp3P58854 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp3P58854 Gm10232-201ENSMUST00000089221 720 ntBASIC21.01■□□□□ 0.95
Tubgcp3P58854 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp3P58854 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp3P58854 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Tubgcp3P58854 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Tubgcp3P58854 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21■□□□□ 0.95
Tubgcp3P58854 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21■□□□□ 0.95
Tubgcp3P58854 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21■□□□□ 0.95
Tubgcp3P58854 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp3P58854 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp3P58854 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp3P58854 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.99■□□□□ 0.95
Tubgcp3P58854 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.99■□□□□ 0.95
Tubgcp3P58854 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp3P58854 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp3P58854 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp3P58854 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp3P58854 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.99■□□□□ 0.95
Tubgcp3P58854 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp3P58854 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Tubgcp3P58854 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.98■□□□□ 0.95
Tubgcp3P58854 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp3P58854 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Tubgcp3P58854 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tubgcp3P58854 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tubgcp3P58854 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Tubgcp3P58854 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubgcp3P58854 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.96■□□□□ 0.95
Tubgcp3P58854 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubgcp3P58854 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms