Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
HDGFP51858 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC33.04■■■□□ 2.88
HDGFP51858 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC33.03■■■□□ 2.88
HDGFP51858 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
HDGFP51858 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
HDGFP51858 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC33.03■■■□□ 2.88
HDGFP51858 AC233992.3-201ENST00000607491 485 ntBASIC33.03■■■□□ 2.88
HDGFP51858 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC33.03■■■□□ 2.88
HDGFP51858 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
HDGFP51858 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
HDGFP51858 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC33.02■■■□□ 2.88
HDGFP51858 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
HDGFP51858 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
HDGFP51858 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
HDGFP51858 AK1-201ENST00000223836 736 ntTSL 3 BASIC33.01■■■□□ 2.87
HDGFP51858 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC33.01■■■□□ 2.87
HDGFP51858 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
HDGFP51858 AC010501.1-201ENST00000606270 1962 ntBASIC33.01■■■□□ 2.87
HDGFP51858 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
HDGFP51858 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
HDGFP51858 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC33■■■□□ 2.87
HDGFP51858 BX842568.3-201ENST00000418104 571 ntBASIC33■■■□□ 2.87
HDGFP51858 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC33■■■□□ 2.87
HDGFP51858 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC33■■■□□ 2.87
HDGFP51858 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC33■■■□□ 2.87
HDGFP51858 C17orf82-201ENST00000623772 1530 ntBASIC33■■■□□ 2.87
HDGFP51858 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
HDGFP51858 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.99■■■□□ 2.87
HDGFP51858 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
HDGFP51858 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
HDGFP51858 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
HDGFP51858 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC32.99■■■□□ 2.87
HDGFP51858 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC32.99■■■□□ 2.87
HDGFP51858 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
HDGFP51858 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC32.99■■■□□ 2.87
HDGFP51858 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
HDGFP51858 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
HDGFP51858 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
HDGFP51858 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
HDGFP51858 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
HDGFP51858 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
HDGFP51858 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
HDGFP51858 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
HDGFP51858 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
HDGFP51858 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
HDGFP51858 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC32.95■■■□□ 2.87
HDGFP51858 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
HDGFP51858 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
HDGFP51858 AC034268.1-201ENST00000441047 882 ntBASIC32.95■■■□□ 2.87
HDGFP51858 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC32.95■■■□□ 2.87
HDGFP51858 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
HDGFP51858 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC32.95■■■□□ 2.87
HDGFP51858 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.95■■■□□ 2.87
HDGFP51858 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC32.95■■■□□ 2.87
HDGFP51858 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
HDGFP51858 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
HDGFP51858 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
HDGFP51858 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC32.95■■■□□ 2.86
HDGFP51858 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
HDGFP51858 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
HDGFP51858 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.94■■■□□ 2.86
HDGFP51858 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
HDGFP51858 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
HDGFP51858 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
HDGFP51858 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
HDGFP51858 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
HDGFP51858 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.93■■■□□ 2.86
HDGFP51858 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
HDGFP51858 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC32.93■■■□□ 2.86
HDGFP51858 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
HDGFP51858 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC32.93■■■□□ 2.86
HDGFP51858 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
HDGFP51858 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
HDGFP51858 AL022069.1-201ENST00000568025 1636 ntBASIC32.92■■■□□ 2.86
HDGFP51858 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.92■■■□□ 2.86
HDGFP51858 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC32.92■■■□□ 2.86
HDGFP51858 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC32.92■■■□□ 2.86
HDGFP51858 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
HDGFP51858 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
HDGFP51858 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
HDGFP51858 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
HDGFP51858 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC32.91■■■□□ 2.86
HDGFP51858 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.91■■■□□ 2.86
HDGFP51858 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC32.91■■■□□ 2.86
HDGFP51858 RARRES2P11-201ENST00000635158 484 ntBASIC32.91■■■□□ 2.86
HDGFP51858 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
HDGFP51858 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
HDGFP51858 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
HDGFP51858 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
HDGFP51858 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC32.9■■■□□ 2.86
HDGFP51858 GRAMD4P2-201ENST00000423297 1097 ntBASIC32.9■■■□□ 2.86
HDGFP51858 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
HDGFP51858 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
HDGFP51858 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
HDGFP51858 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC32.9■■■□□ 2.86
HDGFP51858 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
HDGFP51858 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
HDGFP51858 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC32.89■■■□□ 2.86
HDGFP51858 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
HDGFP51858 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms