Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.92■□□□□ 0.94
Vps4bP46467 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps4bP46467 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps4bP46467 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps4bP46467 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps4bP46467 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps4bP46467 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.91■□□□□ 0.94
Vps4bP46467 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.91■□□□□ 0.94
Vps4bP46467 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps4bP46467 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps4bP46467 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps4bP46467 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps4bP46467 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps4bP46467 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps4bP46467 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps4bP46467 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps4bP46467 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vps4bP46467 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vps4bP46467 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps4bP46467 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps4bP46467 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps4bP46467 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Vps4bP46467 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps4bP46467 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps4bP46467 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Vps4bP46467 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps4bP46467 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps4bP46467 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Vps4bP46467 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.89■□□□□ 0.93
Vps4bP46467 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps4bP46467 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps4bP46467 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
Vps4bP46467 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Vps4bP46467 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps4bP46467 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps4bP46467 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps4bP46467 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps4bP46467 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.88■□□□□ 0.93
Vps4bP46467 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps4bP46467 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps4bP46467 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps4bP46467 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps4bP46467 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps4bP46467 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.87■□□□□ 0.93
Vps4bP46467 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Vps4bP46467 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.87■□□□□ 0.93
Vps4bP46467 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps4bP46467 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps4bP46467 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps4bP46467 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps4bP46467 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps4bP46467 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps4bP46467 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps4bP46467 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps4bP46467 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps4bP46467 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps4bP46467 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.85■□□□□ 0.93
Vps4bP46467 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.85■□□□□ 0.93
Vps4bP46467 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps4bP46467 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps4bP46467 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Vps4bP46467 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps4bP46467 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Vps4bP46467 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps4bP46467 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps4bP46467 Gm45444-201ENSMUST00000211394 898 ntBASIC20.84■□□□□ 0.93
Vps4bP46467 Gm5921-201ENSMUST00000075898 882 ntBASIC20.84■□□□□ 0.93
Vps4bP46467 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps4bP46467 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Vps4bP46467 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.84■□□□□ 0.93
Vps4bP46467 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps4bP46467 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps4bP46467 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps4bP46467 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Vps4bP46467 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps4bP46467 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.83■□□□□ 0.93
Vps4bP46467 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Vps4bP46467 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps4bP46467 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.83■□□□□ 0.93
Vps4bP46467 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Vps4bP46467 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps4bP46467 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps4bP46467 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Vps4bP46467 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps4bP46467 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps4bP46467 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vps4bP46467 Gm15546-201ENSMUST00000122095 826 ntBASIC20.82■□□□□ 0.92
Vps4bP46467 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.82■□□□□ 0.92
Vps4bP46467 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps4bP46467 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Vps4bP46467 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps4bP46467 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps4bP46467 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps4bP46467 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps4bP46467 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps4bP46467 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps4bP46467 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps4bP46467 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps4bP46467 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps4bP46467 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms