Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Kdm5cP41230 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Kdm5cP41230 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Kdm5cP41230 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Kdm5cP41230 Gm40848-201ENSMUST00000221998 324 ntBASIC30.79■■■□□ 2.52
Kdm5cP41230 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Kdm5cP41230 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Kdm5cP41230 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Kdm5cP41230 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Kdm5cP41230 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Kdm5cP41230 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC30.77■■■□□ 2.52
Kdm5cP41230 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Kdm5cP41230 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC30.77■■■□□ 2.52
Kdm5cP41230 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Kdm5cP41230 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Kdm5cP41230 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Kdm5cP41230 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC30.75■■■□□ 2.51
Kdm5cP41230 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC30.75■■■□□ 2.51
Kdm5cP41230 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC30.75■■■□□ 2.51
Kdm5cP41230 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Kdm5cP41230 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Kdm5cP41230 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Kdm5cP41230 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Kdm5cP41230 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Kdm5cP41230 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Kdm5cP41230 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC30.72■■■□□ 2.51
Kdm5cP41230 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC30.72■■■□□ 2.51
Kdm5cP41230 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Kdm5cP41230 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Kdm5cP41230 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Kdm5cP41230 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC30.71■■■□□ 2.51
Kdm5cP41230 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Kdm5cP41230 AC166356.1-201ENSMUST00000228236 1426 ntBASIC30.7■■■□□ 2.51
Kdm5cP41230 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
Kdm5cP41230 Gm42642-201ENSMUST00000200683 355 ntBASIC30.7■■■□□ 2.5
Kdm5cP41230 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Kdm5cP41230 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Kdm5cP41230 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC30.69■■■□□ 2.5
Kdm5cP41230 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Kdm5cP41230 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Kdm5cP41230 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC30.68■■■□□ 2.5
Kdm5cP41230 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Kdm5cP41230 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Kdm5cP41230 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Kdm5cP41230 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Kdm5cP41230 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Kdm5cP41230 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Kdm5cP41230 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Kdm5cP41230 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC30.67■■■□□ 2.5
Kdm5cP41230 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Kdm5cP41230 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Kdm5cP41230 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Kdm5cP41230 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Kdm5cP41230 Smad6-203ENSMUST00000179458 273 ntBASIC30.66■■■□□ 2.5
Kdm5cP41230 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm5cP41230 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Kdm5cP41230 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm5cP41230 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC30.66■■■□□ 2.5
Kdm5cP41230 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm5cP41230 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC30.66■■■□□ 2.5
Kdm5cP41230 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm5cP41230 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Kdm5cP41230 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Kdm5cP41230 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Kdm5cP41230 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC30.65■■■□□ 2.5
Kdm5cP41230 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Kdm5cP41230 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Kdm5cP41230 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Kdm5cP41230 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Kdm5cP41230 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Kdm5cP41230 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Kdm5cP41230 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Kdm5cP41230 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Kdm5cP41230 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Kdm5cP41230 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Kdm5cP41230 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Kdm5cP41230 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Kdm5cP41230 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Kdm5cP41230 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC30.62■■■□□ 2.49
Kdm5cP41230 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Kdm5cP41230 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Kdm5cP41230 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Kdm5cP41230 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
Kdm5cP41230 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Kdm5cP41230 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC30.6■■■□□ 2.49
Kdm5cP41230 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Kdm5cP41230 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Kdm5cP41230 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC30.6■■■□□ 2.49
Kdm5cP41230 Gm12669-201ENSMUST00000122162 1009 ntBASIC30.59■■■□□ 2.49
Kdm5cP41230 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Kdm5cP41230 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Kdm5cP41230 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Kdm5cP41230 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Kdm5cP41230 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Kdm5cP41230 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Kdm5cP41230 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Kdm5cP41230 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Kdm5cP41230 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Kdm5cP41230 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
Kdm5cP41230 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms