Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Fen1P39749 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fen1P39749 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Fen1P39749 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fen1P39749 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fen1P39749 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fen1P39749 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fen1P39749 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.63■□□□□ 0.89
Fen1P39749 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.63■□□□□ 0.89
Fen1P39749 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.63■□□□□ 0.89
Fen1P39749 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Fen1P39749 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fen1P39749 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Fen1P39749 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fen1P39749 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fen1P39749 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Fen1P39749 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fen1P39749 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fen1P39749 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fen1P39749 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Fen1P39749 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Fen1P39749 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Fen1P39749 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Fen1P39749 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fen1P39749 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fen1P39749 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fen1P39749 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fen1P39749 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fen1P39749 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.6■□□□□ 0.89
Fen1P39749 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fen1P39749 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fen1P39749 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fen1P39749 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fen1P39749 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fen1P39749 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fen1P39749 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Fen1P39749 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Fen1P39749 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Fen1P39749 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fen1P39749 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Fen1P39749 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fen1P39749 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fen1P39749 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fen1P39749 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fen1P39749 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.58■□□□□ 0.88
Fen1P39749 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.58■□□□□ 0.88
Fen1P39749 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Fen1P39749 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fen1P39749 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fen1P39749 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fen1P39749 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.57■□□□□ 0.88
Fen1P39749 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fen1P39749 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fen1P39749 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fen1P39749 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fen1P39749 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Fen1P39749 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Fen1P39749 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.56■□□□□ 0.88
Fen1P39749 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Fen1P39749 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fen1P39749 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fen1P39749 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fen1P39749 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Fen1P39749 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Fen1P39749 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Fen1P39749 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fen1P39749 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fen1P39749 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fen1P39749 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fen1P39749 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Fen1P39749 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fen1P39749 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fen1P39749 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.54■□□□□ 0.88
Fen1P39749 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fen1P39749 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fen1P39749 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fen1P39749 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fen1P39749 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fen1P39749 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fen1P39749 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fen1P39749 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fen1P39749 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.53■□□□□ 0.88
Fen1P39749 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fen1P39749 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fen1P39749 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fen1P39749 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.52■□□□□ 0.88
Fen1P39749 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fen1P39749 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fen1P39749 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fen1P39749 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fen1P39749 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Fen1P39749 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Fen1P39749 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fen1P39749 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.51■□□□□ 0.87
Fen1P39749 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fen1P39749 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fen1P39749 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.5■□□□□ 0.87
Fen1P39749 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fen1P39749 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fen1P39749 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms