Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.76■□□□□ 0.75
Cdh4P39038 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.76■□□□□ 0.75
Cdh4P39038 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh4P39038 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh4P39038 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.75■□□□□ 0.75
Cdh4P39038 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh4P39038 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh4P39038 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh4P39038 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh4P39038 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh4P39038 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh4P39038 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh4P39038 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh4P39038 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh4P39038 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh4P39038 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh4P39038 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdh4P39038 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh4P39038 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh4P39038 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdh4P39038 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.73■□□□□ 0.75
Cdh4P39038 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh4P39038 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdh4P39038 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh4P39038 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh4P39038 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.72■□□□□ 0.75
Cdh4P39038 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh4P39038 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh4P39038 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh4P39038 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh4P39038 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdh4P39038 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cdh4P39038 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh4P39038 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdh4P39038 Gm22238-201ENSMUST00000175222 88 ntBASIC19.71■□□□□ 0.75
Cdh4P39038 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh4P39038 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh4P39038 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh4P39038 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh4P39038 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Cdh4P39038 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh4P39038 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh4P39038 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.7■□□□□ 0.74
Cdh4P39038 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh4P39038 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh4P39038 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh4P39038 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.69■□□□□ 0.74
Cdh4P39038 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cdh4P39038 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh4P39038 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdh4P39038 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh4P39038 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh4P39038 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdh4P39038 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh4P39038 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh4P39038 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh4P39038 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cdh4P39038 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.68■□□□□ 0.74
Cdh4P39038 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh4P39038 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh4P39038 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdh4P39038 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdh4P39038 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh4P39038 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh4P39038 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh4P39038 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh4P39038 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh4P39038 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cdh4P39038 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.67■□□□□ 0.74
Cdh4P39038 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh4P39038 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh4P39038 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh4P39038 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh4P39038 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdh4P39038 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh4P39038 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh4P39038 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cdh4P39038 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh4P39038 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh4P39038 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh4P39038 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh4P39038 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdh4P39038 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh4P39038 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh4P39038 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdh4P39038 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
Cdh4P39038 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.65■□□□□ 0.74
Cdh4P39038 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cdh4P39038 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh4P39038 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdh4P39038 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh4P39038 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh4P39038 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh4P39038 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms