Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ercc1P07903 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc1P07903 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc1P07903 Gm11687-201ENSMUST00000118911 886 ntBASIC17.21■□□□□ 0.35
Ercc1P07903 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.21■□□□□ 0.35
Ercc1P07903 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc1P07903 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc1P07903 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.21■□□□□ 0.35
Ercc1P07903 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ercc1P07903 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ercc1P07903 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.34
Ercc1P07903 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Ercc1P07903 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc1P07903 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc1P07903 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc1P07903 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc1P07903 Gm9806-201ENSMUST00000051080 552 ntBASIC17.2■□□□□ 0.34
Ercc1P07903 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc1P07903 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc1P07903 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.19■□□□□ 0.34
Ercc1P07903 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ercc1P07903 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc1P07903 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc1P07903 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc1P07903 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc1P07903 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc1P07903 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc1P07903 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc1P07903 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ercc1P07903 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Ercc1P07903 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ercc1P07903 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ercc1P07903 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.17■□□□□ 0.34
Ercc1P07903 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc1P07903 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.17■□□□□ 0.34
Ercc1P07903 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ercc1P07903 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.17■□□□□ 0.34
Ercc1P07903 Scarna2-201ENSMUST00000157560 414 ntBASIC17.17■□□□□ 0.34
Ercc1P07903 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc1P07903 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.17■□□□□ 0.34
Ercc1P07903 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc1P07903 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc1P07903 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc1P07903 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ercc1P07903 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ercc1P07903 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ercc1P07903 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ercc1P07903 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ercc1P07903 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc1P07903 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc1P07903 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc1P07903 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc1P07903 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc1P07903 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc1P07903 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ercc1P07903 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc1P07903 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc1P07903 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ercc1P07903 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ercc1P07903 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ercc1P07903 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ercc1P07903 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc1P07903 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc1P07903 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc1P07903 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc1P07903 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ercc1P07903 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ercc1P07903 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc1P07903 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ercc1P07903 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc1P07903 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc1P07903 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc1P07903 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc1P07903 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc1P07903 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ercc1P07903 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ercc1P07903 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc1P07903 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ercc1P07903 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.13■□□□□ 0.33
Ercc1P07903 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms