Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.3■□□□□ 0.36
CfdP03953 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CfdP03953 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.3■□□□□ 0.36
CfdP03953 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CfdP03953 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.3■□□□□ 0.36
CfdP03953 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CfdP03953 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CfdP03953 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CfdP03953 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CfdP03953 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CfdP03953 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CfdP03953 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CfdP03953 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CfdP03953 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CfdP03953 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CfdP03953 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CfdP03953 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CfdP03953 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CfdP03953 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CfdP03953 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.28■□□□□ 0.36
CfdP03953 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CfdP03953 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.27■□□□□ 0.36
CfdP03953 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CfdP03953 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CfdP03953 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CfdP03953 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.27■□□□□ 0.36
CfdP03953 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.27■□□□□ 0.36
CfdP03953 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.27■□□□□ 0.36
CfdP03953 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CfdP03953 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CfdP03953 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CfdP03953 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CfdP03953 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.27■□□□□ 0.35
CfdP03953 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CfdP03953 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CfdP03953 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.26■□□□□ 0.35
CfdP03953 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CfdP03953 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CfdP03953 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.26■□□□□ 0.35
CfdP03953 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.26■□□□□ 0.35
CfdP03953 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CfdP03953 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CfdP03953 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CfdP03953 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CfdP03953 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CfdP03953 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CfdP03953 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CfdP03953 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CfdP03953 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CfdP03953 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CfdP03953 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CfdP03953 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.24■□□□□ 0.35
CfdP03953 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CfdP03953 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CfdP03953 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CfdP03953 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CfdP03953 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CfdP03953 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CfdP03953 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CfdP03953 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CfdP03953 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CfdP03953 Gm7432-201ENSMUST00000210343 879 ntBASIC17.23■□□□□ 0.35
CfdP03953 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CfdP03953 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CfdP03953 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.23■□□□□ 0.35
CfdP03953 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CfdP03953 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CfdP03953 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CfdP03953 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CfdP03953 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CfdP03953 Gm11599-201ENSMUST00000118720 878 ntBASIC17.22■□□□□ 0.35
CfdP03953 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CfdP03953 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CfdP03953 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CfdP03953 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CfdP03953 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CfdP03953 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CfdP03953 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CfdP03953 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CfdP03953 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CfdP03953 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.21■□□□□ 0.35
CfdP03953 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CfdP03953 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CfdP03953 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CfdP03953 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CfdP03953 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.2■□□□□ 0.34
CfdP03953 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CfdP03953 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CfdP03953 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CfdP03953 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 143.1 ms