Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ShdO88834 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShdO88834 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ShdO88834 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.15■□□□□ 0.98
ShdO88834 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.15■□□□□ 0.98
ShdO88834 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.15■□□□□ 0.98
ShdO88834 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShdO88834 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.14■□□□□ 0.98
ShdO88834 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.14■□□□□ 0.97
ShdO88834 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ShdO88834 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ShdO88834 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ShdO88834 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ShdO88834 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ShdO88834 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ShdO88834 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ShdO88834 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ShdO88834 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ShdO88834 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ShdO88834 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.13■□□□□ 0.97
ShdO88834 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.13■□□□□ 0.97
ShdO88834 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
ShdO88834 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.13■□□□□ 0.97
ShdO88834 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ShdO88834 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.13■□□□□ 0.97
ShdO88834 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ShdO88834 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShdO88834 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShdO88834 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShdO88834 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShdO88834 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ShdO88834 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ShdO88834 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ShdO88834 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShdO88834 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShdO88834 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.12■□□□□ 0.97
ShdO88834 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShdO88834 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ShdO88834 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.11■□□□□ 0.97
ShdO88834 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShdO88834 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.11■□□□□ 0.97
ShdO88834 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShdO88834 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShdO88834 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShdO88834 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShdO88834 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ShdO88834 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.1■□□□□ 0.97
ShdO88834 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShdO88834 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShdO88834 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShdO88834 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShdO88834 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ShdO88834 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.09■□□□□ 0.97
ShdO88834 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ShdO88834 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.09■□□□□ 0.97
ShdO88834 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.09■□□□□ 0.97
ShdO88834 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShdO88834 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ShdO88834 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
ShdO88834 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShdO88834 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShdO88834 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ShdO88834 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ShdO88834 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShdO88834 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ShdO88834 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShdO88834 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShdO88834 Gm40881-201ENSMUST00000223397 166 ntBASIC21.07■□□□□ 0.96
ShdO88834 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShdO88834 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShdO88834 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShdO88834 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShdO88834 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShdO88834 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShdO88834 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShdO88834 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShdO88834 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ShdO88834 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShdO88834 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShdO88834 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShdO88834 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ShdO88834 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.05■□□□□ 0.96
ShdO88834 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ShdO88834 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.05■□□□□ 0.96
ShdO88834 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShdO88834 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShdO88834 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShdO88834 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ShdO88834 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ShdO88834 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.04■□□□□ 0.96
ShdO88834 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.04■□□□□ 0.96
ShdO88834 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms