Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Dnmt3aO88508 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3aO88508 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3aO88508 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3aO88508 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3aO88508 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3aO88508 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3aO88508 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3aO88508 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3aO88508 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.69■□□□□ 0.9
Dnmt3aO88508 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3aO88508 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.68■□□□□ 0.9
Dnmt3aO88508 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3aO88508 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3aO88508 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3aO88508 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3aO88508 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3aO88508 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.67■□□□□ 0.9
Dnmt3aO88508 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3aO88508 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3aO88508 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.67■□□□□ 0.9
Dnmt3aO88508 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Dnmt3aO88508 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3aO88508 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Dnmt3aO88508 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3aO88508 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.66■□□□□ 0.9
Dnmt3aO88508 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3aO88508 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3aO88508 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3aO88508 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3aO88508 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3aO88508 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.65■□□□□ 0.9
Dnmt3aO88508 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3aO88508 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3aO88508 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3aO88508 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dnmt3aO88508 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dnmt3aO88508 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Dnmt3aO88508 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dnmt3aO88508 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.64■□□□□ 0.89
Dnmt3aO88508 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.64■□□□□ 0.89
Dnmt3aO88508 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dnmt3aO88508 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Dnmt3aO88508 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Dnmt3aO88508 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dnmt3aO88508 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3aO88508 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3aO88508 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3aO88508 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3aO88508 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3aO88508 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3aO88508 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Dnmt3aO88508 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3aO88508 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Dnmt3aO88508 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3aO88508 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dnmt3aO88508 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Dnmt3aO88508 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Dnmt3aO88508 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.61■□□□□ 0.89
Dnmt3aO88508 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dnmt3aO88508 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Dnmt3aO88508 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dnmt3aO88508 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.6■□□□□ 0.89
Dnmt3aO88508 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3aO88508 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Iqck-206ENSMUST00000208658 2891 ntBASIC20.59■□□□□ 0.89
Dnmt3aO88508 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3aO88508 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3aO88508 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3aO88508 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3aO88508 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3aO88508 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Dnmt3aO88508 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Dnmt3aO88508 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnmt3aO88508 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnmt3aO88508 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Dnmt3aO88508 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnmt3aO88508 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Dnmt3aO88508 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnmt3aO88508 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnmt3aO88508 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.56■□□□□ 0.88
Dnmt3aO88508 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Dnmt3aO88508 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms