Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CEACAM4O75871 AC011298.3-201ENST00000615796 283 ntBASIC21.17■□□□□ 0.98
CEACAM4O75871 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CEACAM4O75871 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CEACAM4O75871 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CEACAM4O75871 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CEACAM4O75871 RASA4CP-201ENST00000424092 1398 ntBASIC21.16■□□□□ 0.98
CEACAM4O75871 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CEACAM4O75871 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CEACAM4O75871 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.16■□□□□ 0.98
CEACAM4O75871 MIR6089-201ENST00000616698 64 ntBASIC21.16■□□□□ 0.98
CEACAM4O75871 MIR6821-201ENST00000617625 74 ntBASIC21.16■□□□□ 0.98
CEACAM4O75871 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CEACAM4O75871 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CEACAM4O75871 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CEACAM4O75871 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CEACAM4O75871 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CEACAM4O75871 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CEACAM4O75871 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CEACAM4O75871 CA15P2-201ENST00000611168 834 ntBASIC21.15■□□□□ 0.98
CEACAM4O75871 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CEACAM4O75871 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CEACAM4O75871 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CEACAM4O75871 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CEACAM4O75871 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CEACAM4O75871 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.14■□□□□ 0.97
CEACAM4O75871 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.14■□□□□ 0.97
CEACAM4O75871 AC099791.2-201ENST00000605725 427 ntBASIC21.14■□□□□ 0.97
CEACAM4O75871 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CEACAM4O75871 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CEACAM4O75871 AC009102.2-201ENST00000606772 1639 ntBASIC21.14■□□□□ 0.97
CEACAM4O75871 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.14■□□□□ 0.97
CEACAM4O75871 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CEACAM4O75871 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CEACAM4O75871 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CEACAM4O75871 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CEACAM4O75871 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.13■□□□□ 0.97
CEACAM4O75871 AC097381.1-201ENST00000429019 1296 ntBASIC21.13■□□□□ 0.97
CEACAM4O75871 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CEACAM4O75871 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.13■□□□□ 0.97
CEACAM4O75871 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.13■□□□□ 0.97
CEACAM4O75871 AC027682.1-201ENST00000562846 899 ntBASIC21.13■□□□□ 0.97
CEACAM4O75871 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.13■□□□□ 0.97
CEACAM4O75871 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.13■□□□□ 0.97
CEACAM4O75871 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.13■□□□□ 0.97
CEACAM4O75871 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CEACAM4O75871 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CEACAM4O75871 SLC6A10P-202ENST00000431994 2058 ntBASIC21.12■□□□□ 0.97
CEACAM4O75871 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CEACAM4O75871 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CEACAM4O75871 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CEACAM4O75871 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CEACAM4O75871 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CEACAM4O75871 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.11■□□□□ 0.97
CEACAM4O75871 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CEACAM4O75871 AL022069.1-201ENST00000568025 1636 ntBASIC21.11■□□□□ 0.97
CEACAM4O75871 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CEACAM4O75871 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.1■□□□□ 0.97
CEACAM4O75871 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CEACAM4O75871 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.1■□□□□ 0.97
CEACAM4O75871 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.1■□□□□ 0.97
CEACAM4O75871 AC241377.3-202ENST00000626088 1088 ntBASIC21.1■□□□□ 0.97
CEACAM4O75871 AC241585.3-202ENST00000628937 1088 ntBASIC21.1■□□□□ 0.97
CEACAM4O75871 AC245100.8-202ENST00000629247 1058 ntBASIC21.1■□□□□ 0.97
CEACAM4O75871 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.1■□□□□ 0.97
CEACAM4O75871 C17orf82-201ENST00000623772 1530 ntBASIC21.09■□□□□ 0.97
CEACAM4O75871 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CEACAM4O75871 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.09■□□□□ 0.97
CEACAM4O75871 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.09■□□□□ 0.97
CEACAM4O75871 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CEACAM4O75871 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CEACAM4O75871 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CEACAM4O75871 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.09■□□□□ 0.97
CEACAM4O75871 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CEACAM4O75871 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CEACAM4O75871 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CEACAM4O75871 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CEACAM4O75871 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CEACAM4O75871 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CEACAM4O75871 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CEACAM4O75871 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CEACAM4O75871 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.08■□□□□ 0.97
CEACAM4O75871 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CEACAM4O75871 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.08■□□□□ 0.97
CEACAM4O75871 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CEACAM4O75871 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CEACAM4O75871 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.08■□□□□ 0.96
CEACAM4O75871 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CEACAM4O75871 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CEACAM4O75871 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CEACAM4O75871 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CEACAM4O75871 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.07■□□□□ 0.96
CEACAM4O75871 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.07■□□□□ 0.96
CEACAM4O75871 AC136469.2-201ENST00000623944 1028 ntBASIC21.07■□□□□ 0.96
CEACAM4O75871 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CEACAM4O75871 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CEACAM4O75871 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.06■□□□□ 0.96
CEACAM4O75871 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CEACAM4O75871 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.06■□□□□ 0.96
CEACAM4O75871 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms