Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tspan6O70401 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tspan6O70401 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tspan6O70401 Gm6139-201ENSMUST00000079261 882 ntBASIC20.22■□□□□ 0.83
Tspan6O70401 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tspan6O70401 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tspan6O70401 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tspan6O70401 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Tspan6O70401 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.21■□□□□ 0.83
Tspan6O70401 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tspan6O70401 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Tspan6O70401 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Tspan6O70401 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tspan6O70401 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.21■□□□□ 0.83
Tspan6O70401 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Tspan6O70401 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tspan6O70401 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.21■□□□□ 0.83
Tspan6O70401 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tspan6O70401 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tspan6O70401 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Tspan6O70401 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tspan6O70401 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Tspan6O70401 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Tspan6O70401 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tspan6O70401 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tspan6O70401 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tspan6O70401 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tspan6O70401 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tspan6O70401 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.19■□□□□ 0.82
Tspan6O70401 Mir7075-201ENSMUST00000184187 82 ntBASIC20.19■□□□□ 0.82
Tspan6O70401 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tspan6O70401 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.19■□□□□ 0.82
Tspan6O70401 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.18■□□□□ 0.82
Tspan6O70401 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.18■□□□□ 0.82
Tspan6O70401 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.18■□□□□ 0.82
Tspan6O70401 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.18■□□□□ 0.82
Tspan6O70401 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.18■□□□□ 0.82
Tspan6O70401 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.18■□□□□ 0.82
Tspan6O70401 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tspan6O70401 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tspan6O70401 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tspan6O70401 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.17■□□□□ 0.82
Tspan6O70401 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tspan6O70401 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tspan6O70401 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tspan6O70401 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tspan6O70401 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tspan6O70401 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.16■□□□□ 0.82
Tspan6O70401 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Tspan6O70401 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tspan6O70401 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tspan6O70401 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tspan6O70401 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.15■□□□□ 0.82
Tspan6O70401 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tspan6O70401 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.15■□□□□ 0.82
Tspan6O70401 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tspan6O70401 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tspan6O70401 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.15■□□□□ 0.82
Tspan6O70401 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Tspan6O70401 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
Tspan6O70401 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 Gm43530-201ENSMUST00000195920 274 ntBASIC20.14■□□□□ 0.81
Tspan6O70401 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tspan6O70401 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.14■□□□□ 0.81
Tspan6O70401 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tspan6O70401 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tspan6O70401 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tspan6O70401 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tspan6O70401 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tspan6O70401 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tspan6O70401 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tspan6O70401 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms